RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 PHLDA3Q9Y5J5 127 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 A0A0G2JLM5 398 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 LOC389332A0A1B0GUA5 103 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 PSMB2P49721 201 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 FAM201AQ5SY85 155 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 SPACA3Q8IXA5 215 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 FAM89BQ8N5H3 189 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 CACNG8Q8WXS5 425 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 DUX5Q96PT3 197 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 IL18BPO95998 194 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 IGKV1D-33P01593 117 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 IGKV1-33P01594 117 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 TRGV3P03979 118 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 ZNF497Q6ZNH5 498 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 SBF1O95248 1867 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 CRYGSP22914 178 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 SRSF9Q13242 221 aaKnown RBP eCLIP12.78□□□□□ -0.36
ITGB4-206ENST00000579662 ZIC4Q8N9L1 334 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 MARVELD3Q96A59 401 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 MRPL20Q9BYC9 149 aaKnown RBP12.78□□□□□ -0.36
ITGB4-206ENST00000579662 DOCK4Q8N1I0 1966 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 MPZP25189 248 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 TIMP3P35625 211 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 PEAR1Q5VY43 1037 aaPredicted RBP12.78□□□□□ -0.36
ITGB4-206ENST00000579662 WDR82Q6UXN9 313 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 ZNF383Q8NA42 475 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 PGLYRP4Q96LB8 373 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 ATG101Q9BSB4 218 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 MRPL18Q9H0U6 180 aaKnown RBP12.78□□□□□ -0.36
ITGB4-206ENST00000579662 FBXL15Q9H469 300 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 MAP1LC3AQ9H492 121 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 ERVH48-1M5A8F1 160 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 VN1R17PQ8TDU5 208 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 IGHV1-18A0A0C4DH31 117 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 TRGC1P0CF51 173 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 ARPC1AQ92747 370 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 ANK1P16157 1881 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 GPX1P07203 203 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 GGNQ86UU5 652 aa12.78□□□□□ -0.36
ITGB4-206ENST00000579662 IGKV1-9A0A0C4DH69 117 aa12.77□□□□□ -0.36
ITGB4-206ENST00000579662 PROB1E7EW31 1015 aa12.77□□□□□ -0.36
ITGB4-206ENST00000579662 TRGC2P03986 189 aa12.77□□□□□ -0.36
ITGB4-206ENST00000579662 IFITM2Q01629 132 aa12.77□□□□□ -0.36
ITGB4-206ENST00000579662 SRSF12Q8WXF0 261 aaKnown RBP12.77□□□□□ -0.36
ITGB4-206ENST00000579662 BRWD1Q9NSI6 2320 aa12.77□□□□□ -0.36
ITGB4-206ENST00000579662 CGB1A6NKQ9 187 aa12.77□□□□□ -0.37
ITGB4-206ENST00000579662 PPP1R27Q86WC6 154 aa12.77□□□□□ -0.37
ITGB4-206ENST00000579662 OR4B1Q8NGF8 309 aa12.77□□□□□ -0.37
ITGB4-206ENST00000579662 IGHV3OR16-10A0A075B7F0 116 aa12.77□□□□□ -0.37
ITGB4-206ENST00000579662 CLDND2Q8NHS1 167 aa12.77□□□□□ -0.37
ITGB4-206ENST00000579662 DOCK6Q96HP0 2047 aa12.77□□□□□ -0.37
ITGB4-206ENST00000579662 CLPSP04118 112 aa12.77□□□□□ -0.37
ITGB4-206ENST00000579662 EFNB1P98172 346 aa12.77□□□□□ -0.37
ITGB4-206ENST00000579662 SFRP2Q96HF1 295 aa12.77□□□□□ -0.37
ITGB4-206ENST00000579662 RCC1LQ96I51 464 aaKnown RBP12.77□□□□□ -0.37
ITGB4-206ENST00000579662 C18orf12Q96KH6 178 aa12.77□□□□□ -0.37
ITGB4-206ENST00000579662 UBE2L6O14933 153 aa12.76□□□□□ -0.37
ITGB4-206ENST00000579662 MST1P26927 711 aa12.76□□□□□ -0.37
ITGB4-206ENST00000579662 SRSF7Q16629 238 aaKnown RBP eCLIP12.76□□□□□ -0.37
ITGB4-206ENST00000579662 OR1P1Q8NH06 330 aa12.76□□□□□ -0.37
ITGB4-206ENST00000579662 CBY1Q9Y3M2 126 aa12.76□□□□□ -0.37
ITGB4-206ENST00000579662 FBXL7Q9UJT9 491 aa12.76□□□□□ -0.37
ITGB4-206ENST00000579662 C5orf52A6NGY3 159 aa12.76□□□□□ -0.37
ITGB4-206ENST00000579662 GPX4P36969 197 aaPredicted RBP12.76□□□□□ -0.37
ITGB4-206ENST00000579662 GOLT1AQ6ZVE7 132 aa12.76□□□□□ -0.37
ITGB4-206ENST00000579662 SMUG1Q53HV7 270 aa12.76□□□□□ -0.37
ITGB4-206ENST00000579662 TBX15Q96SF7 602 aa12.76□□□□□ -0.37
ITGB4-206ENST00000579662 PLSCR4Q9NRQ2 329 aa12.76□□□□□ -0.37
ITGB4-206ENST00000579662 NAT1P18440 290 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 C21orf62Q9NYP8 219 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 PRR32B1ATL7 298 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 BTF3P20290 206 aaKnown RBP12.75□□□□□ -0.37
ITGB4-206ENST00000579662 PMCHL1Q16048 86 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 MBNL2Q5VZF2 373 aaKnown RBP12.75□□□□□ -0.37
ITGB4-206ENST00000579662 TCF24Q7RTU0 167 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 NR2C2APQ86WQ0 139 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 OR10S1Q8NGN2 331 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 RPRMQ9NS64 109 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 RBFOX2O43251 390 aaKnown RBP eCLIP12.75□□□□□ -0.37
ITGB4-206ENST00000579662 TGIF2-C20orf24A0A0A6YYL0 155 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 WDR25Q64LD2 544 aaPredicted RBP12.75□□□□□ -0.37
ITGB4-206ENST00000579662 COL25A1Q9BXS0 654 aaPredicted RBP12.75□□□□□ -0.37
ITGB4-206ENST00000579662 RLFQ13129 1914 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 SAA2-SAA4A0A096LPE2 208 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 CBY3A6NI87 242 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 MPTX1A8MV57 137 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 RRHO14718 337 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 EFNA2O43921 213 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 SAA2P0DJI9 122 aaPredicted RBP12.75□□□□□ -0.37
ITGB4-206ENST00000579662 MDKP21741 143 aaPredicted RBP12.75□□□□□ -0.37
ITGB4-206ENST00000579662 HSPB9Q9BQS6 159 aa12.75□□□□□ -0.37
ITGB4-206ENST00000579662 FAM90A9PA6NNJ1 464 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 UPK2O00526 184 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 C19orf54Q5BKX5 351 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 CENPWQ5EE01 88 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 AMMECR1LQ6DCA0 310 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.74□□□□□ -0.37
ITGB4-206ENST00000579662 M0R3E3 92 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 THBDP07204 575 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 FHITP49789 147 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms