RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 MARCH11A6NNE9 402 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 UPK2O00526 184 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 ATG12O94817 140 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 REG1AP05451 166 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 IL6RP08887 468 aaPredicted RBP5.07□□□□□ -1.6
TRAF4-213ENST00000578917 AKAIN1P0CW23 69 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 TRAPPC2P0DI81 140 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 TRAPPC2BP0DI82 140 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 PI3P19957 117 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 TNFSF8P32971 234 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 G6PCP35575 357 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 INSL3P51460 131 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 MECP2P51608 486 aaKnown RBP5.07□□□□□ -1.6
TRAF4-213ENST00000578917 UCP3P55916 312 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 SSBP1Q04837 148 aaKnown RBP5.07□□□□□ -1.6
TRAF4-213ENST00000578917 MEF2DQ14814 521 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 RPEL1Q2QD12 228 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 C15orf32Q32M92 178 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 ASPHD1Q5U4P2 390 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 H2BFWTQ7Z2G1 175 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 TBC1D26Q86UD7 250 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 ZNF429Q86V71 674 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 FAM223AQ8IWN6 122 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 PUSL1Q8N0Z8 303 aaKnown RBP5.07□□□□□ -1.6
TRAF4-213ENST00000578917 TTC9CQ8N5M4 171 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 TMEM229BQ8NBD8 167 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 NECAP1Q8NC96 275 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 ADAD2Q8NCV1 583 aaKnown RBP5.07□□□□□ -1.6
TRAF4-213ENST00000578917 OR4A16Q8NH70 328 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 RNASE11Q8TAA1 199 aaKnown RBP5.07□□□□□ -1.6
TRAF4-213ENST00000578917 DLX4Q92988 240 aaPredicted RBP5.07□□□□□ -1.6
TRAF4-213ENST00000578917 RSRP1Q9BUV0 290 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 MIXL1Q9H2W2 232 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 AKIP1Q9NQ31 210 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 TMEM140Q9NV12 185 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 MCUBQ9NWR8 336 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 AURKAIP1Q9NWT8 199 aaPredicted RBP5.07□□□□□ -1.6
TRAF4-213ENST00000578917 FKBP11Q9NYL4 201 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 BET1LQ9NYM9 111 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 COMMD9Q9P000 198 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 FBXL7Q9UJT9 491 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 C14orf166Q9Y224 244 aaKnown RBP5.07□□□□□ -1.6
TRAF4-213ENST00000578917 ZNF257Q9Y2Q1 563 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 CEPT1Q9Y6K0 416 aa5.07□□□□□ -1.6
TRAF4-213ENST00000578917 TRAV3A0A0B4J244 114 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 OR2J3O76001 311 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 ZNF735P0CB33 412 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 OR13C7P0DN81 318 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 MYOD1P15172 320 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 AREGP15514 252 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 HIST1H1BP16401 226 aaKnown RBP5.06□□□□□ -1.6
TRAF4-213ENST00000578917 PSMB6P28072 239 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 PPP5CP53041 499 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 PIGPP57054 158 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 SYNJ2BPP57105 145 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 OR2B8PP59922 312 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 KRTAP10-11P60412 298 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 SSBP2P81877 361 aaPredicted RBP5.06□□□□□ -1.6
TRAF4-213ENST00000578917 DEFA5Q01523 94 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 DCTN2Q13561 401 aaKnown RBP5.06□□□□□ -1.6
TRAF4-213ENST00000578917 FHL3Q13643 280 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 EXOSC2Q13868 293 aaKnown RBP5.06□□□□□ -1.6
TRAF4-213ENST00000578917 MRGPRG-AS1Q2M3A8 158 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 TRIM16LQ309B1 348 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 PYDC2Q56P42 97 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 SLC25A24Q6NUK1 477 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 CCDC71LQ8N9Z2 235 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 OR4D10Q8NGI6 311 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 OR1L8Q8NGR8 309 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 SMIM4Q8WVI0 70 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 ZNF486Q96H40 463 aaPredicted RBP5.06□□□□□ -1.6
TRAF4-213ENST00000578917 TMEM56Q96MV1 263 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 TSC22D3Q99576 134 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 THAP7Q9BT49 309 aaPredicted RBP5.06□□□□□ -1.6
TRAF4-213ENST00000578917 QTRT1Q9BXR0 403 aaKnown RBP5.06□□□□□ -1.6
TRAF4-213ENST00000578917 FXYD6Q9H0Q3 95 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 THYN1Q9P016 225 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 SCP2D1Q9UJQ7 156 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 PRNDQ9UKY0 176 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 NSG2Q9Y328 171 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 OR51B2Q9Y5P1 312 aa5.06□□□□□ -1.6
TRAF4-213ENST00000578917 PLXNB1O43157 2135 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 C3orf85A0A1B0GTC6 90 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 TEX50A0A1B0GTY4 177 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 WI2-2373I1.2A0A1W2PRP0 233 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 ZNF320A2RRD8 509 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 NPIPB5A8MRT5 1133 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 TEX22C9J3V5 150 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 CTDSPLO15194 276 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 BRI3O95415 125 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 IGHV3-23P01764 117 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 FAUP35544 74 aaKnown RBP5.05□□□□□ -1.6
TRAF4-213ENST00000578917 INPP1P49441 399 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 AKR1C2P52895 323 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 AP3S2P59780 193 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 CD69Q07108 199 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 EGFEM1PQ0D2K5 195 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 SP6Q3SY56 376 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 FAM106AQ4KMX7 169 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 ZNF585BQ52M93 769 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms