RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 FKBP11Q9NYL4 201 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 BET1LQ9NYM9 111 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 LSM4Q9Y4Z0 139 aaKnown RBP7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HEATR1Q9H583 2144 aaKnown RBP7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TEX50A0A1B0GTY4 177 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 SHISA9B4DS77 424 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 J3QR06 171 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CLN5O75503 358 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CXorf1O96002 111 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 DEFA4P12838 97 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 MYOD1P15172 320 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CCL3L1P16619 93 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 S100PP25815 95 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 RPL29P47914 159 aaKnown RBP7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ATP5G3P48201 142 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 B2MP61769 119 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TMEM177Q53S58 311 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 C2orf83Q53S99 150 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 LRRC10Q5BKY1 277 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TMEM200BQ69YZ2 307 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TEPPQ6URK8 271 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 LINC00311Q8N616 119 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 OR5B3Q8NH48 314 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 OSR1Q8TAX0 266 aaPredicted RBP7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 NANPQ8TBE9 248 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ZNF596Q8TC21 504 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 NEUROG1Q92886 237 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 RNASE6Q93091 150 aaKnown RBP7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ANAPC16Q96DE5 110 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 C1orf159Q96HA4 380 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 WFIKKN1Q96NZ8 548 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 OR5B12Q96R08 314 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PYGO2Q9BRQ0 406 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HINT2Q9BX68 163 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PATZ1Q9HBE1 687 aaKnown RBP7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 DYSFO75923 2080 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 DSCAML1Q8TD84 2053 aa7.63□□□□□ -1.19
CDK5RAP3-208ENST00000578525 DSCAMO60469 2012 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PRR14LQ5THK1 2151 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ELOA3CA0A087WX78 387 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 E7EQL1 145 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 H0YJW9 148 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 FCN3O75636 299 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TRGC2P03986 189 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PFN1P07737 140 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 SAA1P0DJI8 122 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ARL14EPLP0DKL9 152 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 NPPCP23582 126 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 GCHFRP30047 84 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 GALR1P47211 349 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CDX1P47902 265 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 UBE2G2P60604 165 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 RHOBP62745 196 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 GNB1P62873 340 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CST9LP1Q5W188 147 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 LYPD2Q6UXB3 125 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 SPNS3Q6ZMD2 512 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 DMRTC2Q8IXT2 367 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 STPG3Q8N7X2 389 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 OR1L8Q8NGR8 309 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 OR4A5Q8NH83 315 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 SSMEM1Q8WWF3 244 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 H1FXQ92522 213 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 VKORC1Q9BQB6 163 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 SRD5A3Q9H8P0 318 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 DOK5Q9P104 306 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ZNRD1Q9P1U0 126 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 KAAG1Q9UBP8 84 aa7.62□□□□□ -1.19
CDK5RAP3-208ENST00000578525 BDP1A6H8Y1 2624 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 SRRM4A7MD48 611 aaKnown RBP7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 INS-IGF2F8WCM5 200 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HIST1H2BKO60814 126 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 MT-CO2P00403 227 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HIST1H2BJP06899 126 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 RNASE2P10153 161 aaKnown RBP7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 IGFBP2P18065 325 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HIST1H2BOP23527 126 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 LOXP28300 417 aaPredicted RBP7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HIST1H2BBP33778 126 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 SRP14P37108 136 aaKnown RBP7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 DLX6P56179 175 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HIST1H2BDP58876 126 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HIST1H2BCP62807 126 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PRR20EP86478 221 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PRR20CP86479 221 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PRR20DP86480 221 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PRR20BP86481 221 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PRR20AP86496 221 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 EFNB3Q15768 340 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HIST2H2BEQ16778 126 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 SLC16A13Q7RTY0 426 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TMEM144Q7Z5S9 345 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PDPNQ86YL7 162 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ZCCHC24Q8N2G6 241 aaKnown RBP7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 OR5AN1Q8NGI8 311 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ABHD5Q8WTS1 349 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CCL17Q92583 94 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 FRZBQ92765 325 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HIST1H2BHQ93079 126 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms