RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 IFNA17P01571 189 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 POLR2GP62487 172 aaKnown RBP eCLIP10.73□□□□□ -0.69
SRSF1-202ENST00000578430 SCGB2A2Q13296 93 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 PRSS8Q16651 343 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 Q5BKY6 102 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 FAM120AOSQ5T036 256 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 C16orf82Q7Z2V1 217 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 PPP1R27Q86WC6 154 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 RITA1Q96K30 269 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 SSX3Q99909 188 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 RNF126Q9BV68 326 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 QTRT1Q9BXR0 403 aaKnown RBP10.73□□□□□ -0.69
SRSF1-202ENST00000578430 COMMD5Q9GZQ3 224 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 PRDM13Q9H4Q3 707 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 YAE1D1Q9NRH1 226 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 MBD2Q9UBB5 411 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 OR51B2Q9Y5P1 312 aa10.73□□□□□ -0.69
SRSF1-202ENST00000578430 FXYD6-FXYD2A0A087WZ82 144 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 TRAV3A0A0B4J244 114 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 H0YIZ8 118 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 BOLA2-SMG1P6H3BVE0 249 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 L7N2F9 121 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 ACTL6BO94805 426 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 PAX6P26367 422 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 NUP62P37198 522 aaPredicted RBP10.72□□□□□ -0.69
SRSF1-202ENST00000578430 OR2B8PP59922 312 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 VAMP2P63027 116 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 HNF4GQ14541 408 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 PLGLAQ15195 96 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 C5orf64Q2M2E5 130 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 ZNF546Q86UE3 836 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 OR1L8Q8NGR8 309 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 OR5R1Q8NH85 324 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 PIFOQ8TCI5 191 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 SMIM8Q96KF7 97 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 CLCC1Q96S66 551 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 GSX1Q9H4S2 264 aaPredicted RBP10.72□□□□□ -0.69
SRSF1-202ENST00000578430 ZNF430Q9H8G1 570 aaPredicted RBP10.72□□□□□ -0.69
SRSF1-202ENST00000578430 PLSCR3Q9NRY6 295 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 TCF19Q9Y242 345 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 RCL1Q9Y2P8 373 aaKnown RBP10.72□□□□□ -0.69
SRSF1-202ENST00000578430 WSB1Q9Y6I7 421 aa10.72□□□□□ -0.69
SRSF1-202ENST00000578430 M0QZK8 103 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 FGF16O43320 207 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 CHST1O43916 411 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 SSSCA1O60232 199 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 OR2F2O95006 317 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 CD24P25063 80 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 CNTFRP26992 372 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 SRP14P37108 136 aaKnown RBP10.71□□□□□ -0.69
SRSF1-202ENST00000578430 P2RY1P47900 373 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 EIF2B2P49770 351 aaKnown RBP10.71□□□□□ -0.69
SRSF1-202ENST00000578430 F2RL1P55085 397 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 RPL23AP62750 156 aaKnown RBP10.71□□□□□ -0.69
SRSF1-202ENST00000578430 PRCDQ00LT1 54 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 DEFB112Q30KQ8 113 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 MRPL41Q8IXM3 137 aaKnown RBP10.71□□□□□ -0.69
SRSF1-202ENST00000578430 INO80EQ8NBZ0 244 aaPredicted RBP10.71□□□□□ -0.69
SRSF1-202ENST00000578430 OR11H4Q8NGC9 324 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 DTD1Q8TEA8 209 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 DCUN1D4Q92564 292 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 RBM14Q96PK6 669 aaKnown RBP10.71□□□□□ -0.69
SRSF1-202ENST00000578430 MAGT1Q9H0U3 335 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 FBXL15Q9H469 300 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 RBKSQ9H477 322 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 C11orf1Q9H5F2 150 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 OR5AC2Q9NZP5 309 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 TNFSF18Q9UNG2 199 aa10.71□□□□□ -0.69
SRSF1-202ENST00000578430 TEX50A0A1B0GTY4 177 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 A0A1W2PN81 502 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 A6NDX4 124 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 BTBD17A6NE02 478 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 NCBP2LA6PVI3 153 aaKnown RBP10.7□□□□□ -0.7
SRSF1-202ENST00000578430 CEBPZOSA8MTT3 80 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 INS-IGF2F8WCM5 200 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 H3BUX3 64 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 TSC22D2O75157 780 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 SCAF4O95104 1147 aaKnown RBP10.7□□□□□ -0.7
SRSF1-202ENST00000578430 C4BPBP20851 252 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 CHRNA7P36544 502 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 ATP5IP56385 69 aaPredicted RBP10.7□□□□□ -0.7
SRSF1-202ENST00000578430 RPP30P78346 268 aaKnown RBP10.7□□□□□ -0.7
SRSF1-202ENST00000578430 OR2F1Q13607 317 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 MRGPRG-AS1Q2M3A8 158 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 TUSC1Q2TAM9 212 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 Q6YL49 198 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 ACOT7LQ6ZUV0 252 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 BCL6BQ8N143 479 aaPredicted RBP10.7□□□□□ -0.7
SRSF1-202ENST00000578430 RBMXL1Q96E39 390 aaKnown RBP10.7□□□□□ -0.7
SRSF1-202ENST00000578430 SRSF8Q9BRL6 282 aaKnown RBP10.7□□□□□ -0.7
SRSF1-202ENST00000578430 HIPK2Q9H2X6 1198 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 ENY2Q9NPA8 101 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 NDUFA4L2Q9NRX3 87 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 MOB4Q9Y3A3 225 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 CSPG4Q6UVK1 2322 aa10.7□□□□□ -0.7
SRSF1-202ENST00000578430 A0A0D9SG52 128 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 NXPH3O95157 252 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 IER3P46695 156 aa10.69□□□□□ -0.7
SRSF1-202ENST00000578430 RPL27AP46776 148 aaKnown RBP10.69□□□□□ -0.7
SRSF1-202ENST00000578430 COMPP49747 757 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms