RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 ELLP55199 621 aaPredicted RBP22.46■■□□□ 1.19
LIMD2-203ENST00000578067 PRCDQ00LT1 54 aa22.46■■□□□ 1.19
LIMD2-203ENST00000578067 SREK1IP1Q8N9Q2 155 aaPredicted RBP22.46■■□□□ 1.19
LIMD2-203ENST00000578067 HINT2Q9BX68 163 aa22.46■■□□□ 1.19
LIMD2-203ENST00000578067 C22orf46C9J442 243 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 PRSS46E5RG02 174 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 DLX1P56177 255 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 BEND2Q8NDZ0 799 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 SLC24A4Q8NFF2 622 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 TMA7Q9Y2S6 64 aaKnown RBP22.45■■□□□ 1.18
LIMD2-203ENST00000578067 TEX50A0A1B0GTY4 177 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 A6NNC1 897 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 HNF4GQ14541 408 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 OR5B3Q8NH48 314 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 MBD3L1Q8WWY6 194 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 NPCDR1Q9BY65 106 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 PLEKHA3Q9HB20 300 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 ONECUT1Q9UBC0 465 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 WDR83OSQ9Y284 106 aa22.45■■□□□ 1.18
LIMD2-203ENST00000578067 MALRD1Q5VYJ5 2156 aa22.44■■□□□ 1.18
LIMD2-203ENST00000578067 RBFOX3A6NFN3 312 aa22.44■■□□□ 1.18
LIMD2-203ENST00000578067 IFNA4P05014 189 aa22.44■■□□□ 1.18
LIMD2-203ENST00000578067 NPY1RP25929 384 aa22.44■■□□□ 1.18
LIMD2-203ENST00000578067 ZNF709Q8N972 641 aa22.44■■□□□ 1.18
LIMD2-203ENST00000578067 SMDT1Q9H4I9 107 aa22.44■■□□□ 1.18
LIMD2-203ENST00000578067 SPTBN1Q01082 2364 aaKnown RBP22.43■■□□□ 1.18
LIMD2-203ENST00000578067 ZNF726P1Q15940 193 aa22.43■■□□□ 1.18
LIMD2-203ENST00000578067 OR4A5Q8NH83 315 aa22.43■■□□□ 1.18
LIMD2-203ENST00000578067 VSTM2AQ8TAG5 236 aa22.43■■□□□ 1.18
LIMD2-203ENST00000578067 SSBP3Q9BWW4 388 aaPredicted RBP22.43■■□□□ 1.18
LIMD2-203ENST00000578067 KPTNQ9Y664 436 aa22.43■■□□□ 1.18
LIMD2-203ENST00000578067 HRNRQ86YZ3 2850 aaPredicted RBP22.43■■□□□ 1.18
LIMD2-203ENST00000578067 C17orf112F2Z3M2 114 aa22.43■■□□□ 1.18
LIMD2-203ENST00000578067 DLK1P80370 383 aa22.43■■□□□ 1.18
LIMD2-203ENST00000578067 RCC1LQ96I51 464 aaKnown RBP22.43■■□□□ 1.18
LIMD2-203ENST00000578067 RARRES2Q99969 163 aa22.43■■□□□ 1.18
LIMD2-203ENST00000578067 BUB1B-PAK6H3BSN5 160 aa22.42■■□□□ 1.18
LIMD2-203ENST00000578067 SNAPINO95295 136 aa22.42■■□□□ 1.18
LIMD2-203ENST00000578067 USF1P22415 310 aaPredicted RBP22.42■■□□□ 1.18
LIMD2-203ENST00000578067 GPR6P46095 362 aaPredicted RBP22.42■■□□□ 1.18
LIMD2-203ENST00000578067 ACSM6Q6P461 480 aa22.42■■□□□ 1.18
LIMD2-203ENST00000578067 TMEM167AQ8TBQ9 72 aa22.42■■□□□ 1.18
LIMD2-203ENST00000578067 CA2P00918 260 aa22.41■■□□□ 1.18
LIMD2-203ENST00000578067 MBP02144 154 aa22.41■■□□□ 1.18
LIMD2-203ENST00000578067 OPN1MWP04001 364 aa22.41■■□□□ 1.18
LIMD2-203ENST00000578067 OPN1MW2P0DN77 364 aa22.41■■□□□ 1.18
LIMD2-203ENST00000578067 OPN1MW3P0DN78 364 aa22.41■■□□□ 1.18
LIMD2-203ENST00000578067 COX7A1P24310 79 aa22.41■■□□□ 1.18
LIMD2-203ENST00000578067 PRB3Q04118 309 aaPredicted RBP22.41■■□□□ 1.18
LIMD2-203ENST00000578067 LRBAP50851 2863 aa22.41■■□□□ 1.18
LIMD2-203ENST00000578067 NDUFS7O75251 213 aa22.41■■□□□ 1.18
LIMD2-203ENST00000578067 IGLV2-23P01705 113 aa22.41■■□□□ 1.18
LIMD2-203ENST00000578067 RPL8P62917 257 aaKnown RBP22.41■■□□□ 1.18
LIMD2-203ENST00000578067 SLC35B3Q9H1N7 401 aa22.41■■□□□ 1.18
LIMD2-203ENST00000578067 LOC105371242A0A075B767 164 aa22.4■■□□□ 1.18
LIMD2-203ENST00000578067 SMCO3A2RU48 225 aa22.4■■□□□ 1.18
LIMD2-203ENST00000578067 EFNA4P52798 201 aa22.4■■□□□ 1.18
LIMD2-203ENST00000578067 LCN15Q6UWW0 184 aa22.4■■□□□ 1.18
LIMD2-203ENST00000578067 COMMD5Q9GZQ3 224 aa22.4■■□□□ 1.18
LIMD2-203ENST00000578067 AMMECR1Q9Y4X0 333 aaPredicted RBP22.4■■□□□ 1.18
LIMD2-203ENST00000578067 MPDU1O75352 247 aa22.4■■□□□ 1.18
LIMD2-203ENST00000578067 IGKV1D-33P01593 117 aa22.4■■□□□ 1.18
LIMD2-203ENST00000578067 IGKV1-33P01594 117 aa22.4■■□□□ 1.18
LIMD2-203ENST00000578067 FFAR4Q5NUL3 377 aa22.4■■□□□ 1.18
LIMD2-203ENST00000578067 ZNF787Q6DD87 383 aa22.4■■□□□ 1.18
LIMD2-203ENST00000578067 SSX7Q7RTT5 188 aa22.4■■□□□ 1.18
LIMD2-203ENST00000578067 RPP25LQ8N5L8 163 aaKnown RBP22.4■■□□□ 1.18
LIMD2-203ENST00000578067 Q8N7P7 452 aa22.4■■□□□ 1.18
LIMD2-203ENST00000578067 HAGHQ16775 308 aa22.39■■□□□ 1.17
LIMD2-203ENST00000578067 TREML4Q6UXN2 200 aa22.39■■□□□ 1.17
LIMD2-203ENST00000578067 PNKDQ8N490 385 aa22.39■■□□□ 1.17
LIMD2-203ENST00000578067 OR4P4Q8NGL7 312 aa22.39■■□□□ 1.17
LIMD2-203ENST00000578067 CLDND2Q8NHS1 167 aa22.39■■□□□ 1.17
LIMD2-203ENST00000578067 ENSAO43768 121 aaKnown RBP22.38■■□□□ 1.17
LIMD2-203ENST00000578067 LGALS7P47929 136 aa22.38■■□□□ 1.17
LIMD2-203ENST00000578067 VMA21Q3ZAQ7 101 aa22.38■■□□□ 1.17
LIMD2-203ENST00000578067 NDUFA4L2Q9NRX3 87 aa22.38■■□□□ 1.17
LIMD2-203ENST00000578067 INSIG2Q9Y5U4 225 aa22.38■■□□□ 1.17
LIMD2-203ENST00000578067 ATP5IP56385 69 aaPredicted RBP22.38■■□□□ 1.17
LIMD2-203ENST00000578067 ARF6P62330 175 aa22.38■■□□□ 1.17
LIMD2-203ENST00000578067 OR1L8Q8NGR8 309 aa22.38■■□□□ 1.17
LIMD2-203ENST00000578067 IGHV3-72A0A0B4J1Y9 119 aa22.37■■□□□ 1.17
LIMD2-203ENST00000578067 IGHV1-3A0A0C4DH29 117 aa22.37■■□□□ 1.17
LIMD2-203ENST00000578067 M0R1W7 72 aa22.37■■□□□ 1.17
LIMD2-203ENST00000578067 DNASE2O00115 360 aaPredicted RBP22.37■■□□□ 1.17
LIMD2-203ENST00000578067 ZNF506Q5JVG8 444 aa22.37■■□□□ 1.17
LIMD2-203ENST00000578067 OR10G4Q8NGN3 311 aa22.37■■□□□ 1.17
LIMD2-203ENST00000578067 OR10G9Q8NGN4 311 aa22.37■■□□□ 1.17
LIMD2-203ENST00000578067 OR10G7Q8NGN6 311 aa22.37■■□□□ 1.17
LIMD2-203ENST00000578067 SLC39A9Q9NUM3 307 aa22.37■■□□□ 1.17
LIMD2-203ENST00000578067 MAP1LC3B2A6NCE7 125 aa22.36■■□□□ 1.17
LIMD2-203ENST00000578067 RITA1Q96K30 269 aa22.36■■□□□ 1.17
LIMD2-203ENST00000578067 MAP1LC3BQ9GZQ8 125 aa22.36■■□□□ 1.17
LIMD2-203ENST00000578067 NPVFQ9HCQ7 196 aa22.36■■□□□ 1.17
LIMD2-203ENST00000578067 NPBWR1P48145 328 aa22.36■■□□□ 1.17
LIMD2-203ENST00000578067 MOB3BQ86TA1 216 aa22.36■■□□□ 1.17
LIMD2-203ENST00000578067 SOX15O60248 233 aa22.35■■□□□ 1.17
LIMD2-203ENST00000578067 FGF8P55075 233 aaPredicted RBP22.35■■□□□ 1.17
LIMD2-203ENST00000578067 ICAM4Q14773 271 aa22.35■■□□□ 1.17
LIMD2-203ENST00000578067 RPEQ96AT9 228 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms