RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 STEAP1BQ6NZ63 245 aa12.36□□□□□ -0.43
VAPA-204ENST00000577901 DMBX1Q8NFW5 382 aa12.36□□□□□ -0.43
VAPA-204ENST00000577901 MUC7Q8TAX7 377 aa12.36□□□□□ -0.43
VAPA-204ENST00000577901 RBM38Q9H0Z9 239 aaKnown RBP12.36□□□□□ -0.43
VAPA-204ENST00000577901 COA4Q9NYJ1 87 aa12.36□□□□□ -0.43
VAPA-204ENST00000577901 COMMD9Q9P000 198 aa12.36□□□□□ -0.43
VAPA-204ENST00000577901 EPPK1P58107 5090 aaKnown RBP12.36□□□□□ -0.43
VAPA-204ENST00000577901 C13orf42A0A1B0GVH6 325 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 S1PR2O95136 353 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 CD74P04233 296 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 OR8U8P0C7N1 319 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 OR9G9P0C7N8 305 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 APELAP0DMC3 54 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 PGAM2P15259 253 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 S100A5P33763 92 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 LPAR6P43657 344 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 RPL27AP46776 148 aaKnown RBP12.35□□□□□ -0.43
VAPA-204ENST00000577901 INSL3P51460 131 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 RPL8P62917 257 aaKnown RBP12.35□□□□□ -0.43
VAPA-204ENST00000577901 ZNF616Q08AN1 781 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 MEF2DQ14814 521 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 POU2AF1Q16633 256 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 CASC10Q5T4H9 136 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 SLC25A42Q86VD7 318 aa12.35□□□□□ -0.43
VAPA-204ENST00000577901 ZNF486Q96H40 463 aaPredicted RBP12.35□□□□□ -0.43
VAPA-204ENST00000577901 LGALS1P09382 135 aaKnown RBP12.34□□□□□ -0.43
VAPA-204ENST00000577901 HLA-GP17693 338 aa12.34□□□□□ -0.43
VAPA-204ENST00000577901 SCGB2B2Q4G0G5 96 aa12.34□□□□□ -0.43
VAPA-204ENST00000577901 TBC1D26Q86UD7 250 aa12.34□□□□□ -0.43
VAPA-204ENST00000577901 LHFPL1Q86WI0 220 aa12.34□□□□□ -0.43
VAPA-204ENST00000577901 TERB2Q8NHR7 220 aa12.34□□□□□ -0.43
VAPA-204ENST00000577901 RCHY1Q96PM5 261 aa12.34□□□□□ -0.43
VAPA-204ENST00000577901 FYTTD1Q96QD9 318 aaKnown RBP12.34□□□□□ -0.43
VAPA-204ENST00000577901 FAM212BQ9NTI7 297 aaPredicted RBP12.34□□□□□ -0.43
VAPA-204ENST00000577901 LYSTQ99698 3801 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 DPPA5A6NC42 116 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 DISC1C4P0D8 188 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 UPK2O00526 184 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 GSTZ1O43708 216 aaPredicted RBP12.33□□□□□ -0.44
VAPA-204ENST00000577901 IGHV3-11P01762 117 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 C10orf55Q5SWW7 151 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 SBSPONQ8IVN8 264 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 TTC9CQ8N5M4 171 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 ADAD2Q8NCV1 583 aaKnown RBP12.33□□□□□ -0.44
VAPA-204ENST00000577901 OR4D10Q8NGI6 311 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 ZFAND1Q8TCF1 268 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 USMG5Q96IX5 58 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 SOSTQ9BQB4 213 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 COMMD5Q9GZQ3 224 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 ALX4Q9H161 411 aaPredicted RBP12.33□□□□□ -0.44
VAPA-204ENST00000577901 SLC2A9Q9NRM0 540 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 TMEM140Q9NV12 185 aa12.33□□□□□ -0.44
VAPA-204ENST00000577901 MARCH11A6NNE9 402 aa12.32□□□□□ -0.44
VAPA-204ENST00000577901 LINC01619G3V211 115 aa12.32□□□□□ -0.44
VAPA-204ENST00000577901 KRASP01116 189 aa12.32□□□□□ -0.44
VAPA-204ENST00000577901 HSPB1P04792 205 aaKnown RBP12.32□□□□□ -0.44
VAPA-204ENST00000577901 IL6RP08887 468 aaPredicted RBP12.32□□□□□ -0.44
VAPA-204ENST00000577901 FGF2P09038 288 aa12.32□□□□□ -0.44
VAPA-204ENST00000577901 ZNF735P0CB33 412 aa12.32□□□□□ -0.44
VAPA-204ENST00000577901 AKAIN1P0CW23 69 aa12.32□□□□□ -0.44
VAPA-204ENST00000577901 ZNF585BQ52M93 769 aa12.32□□□□□ -0.44
VAPA-204ENST00000577901 ZNF429Q86V71 674 aa12.32□□□□□ -0.44
VAPA-204ENST00000577901 CADM3Q8N126 398 aa12.32□□□□□ -0.44
VAPA-204ENST00000577901 NDUFA13Q9P0J0 144 aa12.32□□□□□ -0.44
VAPA-204ENST00000577901 HMX3A6NHT5 357 aa12.31□□□□□ -0.44
VAPA-204ENST00000577901 SNAPC5O75971 98 aa12.31□□□□□ -0.44
VAPA-204ENST00000577901 DHFRP00374 187 aa12.31□□□□□ -0.44
VAPA-204ENST00000577901 SERPINE2P07093 398 aa12.31□□□□□ -0.44
VAPA-204ENST00000577901 RPA2P15927 270 aa12.31□□□□□ -0.44
VAPA-204ENST00000577901 PPP5CP53041 499 aa12.31□□□□□ -0.44
VAPA-204ENST00000577901 PIGPP57054 158 aa12.31□□□□□ -0.44
VAPA-204ENST00000577901 RND3P61587 244 aa12.31□□□□□ -0.44
VAPA-204ENST00000577901 CCDC71LQ8N9Z2 235 aa12.31□□□□□ -0.44
VAPA-204ENST00000577901 DCUN1D4Q92564 292 aa12.31□□□□□ -0.44
VAPA-204ENST00000577901 THAP7Q9BT49 309 aaPredicted RBP12.31□□□□□ -0.44
VAPA-204ENST00000577901 RANGRFQ9HD47 186 aaPredicted RBP12.31□□□□□ -0.44
VAPA-204ENST00000577901 COPZ2Q9P299 210 aa12.31□□□□□ -0.44
VAPA-204ENST00000577901 ZNF257Q9Y2Q1 563 aa12.31□□□□□ -0.44
VAPA-204ENST00000577901 BIRC6Q9NR09 4857 aa12.31□□□□□ -0.44
VAPA-204ENST00000577901 STARD9Q9P2P6 4700 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 IGHV4OR15-8A0A075B7B6 117 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 A0A087WW49 117 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 TRAV3A0A0B4J244 114 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 ANKRD20A5PA0PJZ0 165 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 NPIPB5A8MRT5 1133 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 TEX22C9J3V5 150 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 E7EUB6 86 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 OVOL1O14753 267 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 PI3P19957 117 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 PTBP1P26599 531 aaKnown RBP eCLIP12.3□□□□□ -0.443e-7■■■□□ 15.2
VAPA-204ENST00000577901 G6PCP35575 357 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 PYDC2Q56P42 97 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 PRRT1Q99946 306 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 DNAH1Q9P2D7 4330 aa12.3□□□□□ -0.44
VAPA-204ENST00000577901 TENM2Q9NT68 2774 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 FAM223BA6NKX1 122 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 SAP30O75446 220 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 PRH1P02810 166 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 CRYGCP07315 174 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 CTSDP07339 412 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms