RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 PPP1R17O96001 155 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 LHBP01229 141 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 GIPP09681 153 aaPredicted RBP2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 OR5AL1P0C617 328 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 ANOS1P23352 680 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 COL8A2P25067 703 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 SSTR5P35346 364 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 CAMPP49913 170 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 CRYBA2P53672 197 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 DAD1P61803 113 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 CIRBPQ14011 172 aaKnown RBP2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF146Q15072 292 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 SAPCD1Q5SSQ6 148 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 C9orf66Q5T8R8 295 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF474Q6S9Z5 364 aaPredicted RBP2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 SVBPQ8N300 66 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 OR2D3Q8NGH3 330 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 COPS9Q8WXC6 57 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 WDR89Q96FK6 387 aaPredicted RBP2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 WNT10AQ9GZT5 417 aa2.46□□□□□ -2.02
SMCHD1-203ENST00000577880 NRXN2Q9P2S2 1712 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 ATAD5Q96QE3 1844 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 IGLV3-32A0A0A0MS00 114 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 IGLV1-36A0A0B4J1U3 117 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 LINC01619G3V211 115 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 LY6HO94772 140 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF688P0C7X2 276 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 PRTN3P24158 256 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 PRSS8Q16651 343 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SMUG1Q53HV7 270 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 MEIG1Q5JSS6 88 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 ALKAL2Q6UX46 152 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SCGB1D4Q6XE38 83 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 TCF24Q7RTU0 167 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 BAP18Q8IXM2 172 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 OR8D4Q8NGM9 314 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SRSF12Q8WXF0 261 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 NPIPB3Q92617 1050 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 ST6GALNAC6Q969X2 333 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 MARC2Q969Z3 335 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SGK494Q96LW2 274 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 FAM103A1Q9BTL3 118 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 C1QTNF5Q9BXJ0 243 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 TMPRSS5Q9H3S3 457 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 DUSP21Q9H596 190 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 PRORYQ9H606 182 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SDF2L1Q9HCN8 221 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 DNAJC4Q9NNZ3 241 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 HSF4Q9ULV5 492 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 TCF19Q9Y242 345 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 TECTAO75443 2155 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 TRGV11A0A075B6L2 103 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 CENPVL1A0A0U1RR11 272 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 TEX50A0A1B0GTY4 177 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 H0YL77 283 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 HOXA3O43365 443 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 CXorf1O96002 111 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 RCC1P18754 421 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SAA4P35542 130 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 ASIPP42127 132 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SULT1A1P50225 295 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 UBE2E1P51965 193 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 MFAP2P55001 183 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SUMO1P63165 101 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 NHLH2Q02577 135 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 ADIPOQQ15848 244 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 BATFQ16520 125 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 MOGAT2Q3SYC2 334 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 COX19Q49B96 90 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 OR10J3Q5JRS4 329 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 MBNL2Q5VZF2 373 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 FAAP20Q6NZ36 180 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SPSB3Q6PJ21 355 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SHISA2Q6UWI4 295 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 PQLC2Q6ZP29 291 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 MSRB3Q8IXL7 192 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 C10orf111Q8N326 155 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 FAM169BQ8N8A8 192 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 TEX45Q8NA69 505 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 DYRK2Q92630 601 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 DMRTA2Q96SC8 542 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 RNF5Q99942 180 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SOSTQ9BQB4 213 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SLC50A1Q9BRV3 221 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 CHCHD5Q9BSY4 110 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 ALKBH7Q9BT30 221 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 SEC11CQ9BY50 192 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 MRPL20Q9BYC9 149 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 AKIP1Q9NQ31 210 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF586Q9NXT0 402 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 TSSC4Q9Y5U2 329 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 PXMP4Q9Y6I8 212 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 S4R3C0 116 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 PATJQ8NI35 1801 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 MARCH11A6NNE9 402 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 FOXI3A8MTJ6 420 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 F5H768 121 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 RRHO14718 337 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 TGOLN2O43493 480 aa2.45□□□□□ -2.02
SMCHD1-203ENST00000577880 PLAUP00749 431 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms