RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 PCLOQ9Y6V0 5065 aa8.62□□□□□ -1.03
CTDNEP1-212ENST00000576613 IGKV1D-8A0A087WSZ0 117 aa8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 IGHV3-35A0A0C4DH35 117 aa8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 PDCD5O14737 125 aa8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 CYB5BO43169 146 aa8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 IFNA4P05014 189 aa8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 HLA-GP17693 338 aa8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 NFYAP23511 347 aaPredicted RBP8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 RBMS2Q15434 407 aaKnown RBP8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 ODF3L2Q3SX64 289 aa8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 OR4A5Q8NH83 315 aa8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 ZNF502Q8TBZ5 544 aa8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 TMEM190Q8WZ59 177 aa8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 ZNF436Q9C0F3 470 aaPredicted RBP8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 MAP6D1Q9H9H5 199 aa8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 ACOT13Q9NPJ3 140 aa8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 TAS2R8Q9NYW2 309 aa8.61□□□□□ -1.03
CTDNEP1-212ENST00000576613 DNAH10Q8IVF4 4471 aa8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 TGOLN2O43493 480 aa8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 IGLV2-14P01704 120 aa8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 PTBP1P26599 531 aaKnown RBP eCLIP8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 TCTAP57738 103 aa8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 FABP5Q01469 135 aa8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 MLLT11Q13015 90 aaPredicted RBP8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 IRF3Q14653 427 aa8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 ZNF66Q6ZN08 573 aa8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 SSX9Q7RTT3 188 aa8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 C11orf45Q8TAV5 145 aa8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 SRSF8Q9BRL6 282 aaKnown RBP8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 VCXQ9H320 206 aa8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 HRASLSQ9HDD0 168 aa8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 BET1LQ9NYM9 111 aa8.6□□□□□ -1.03
CTDNEP1-212ENST00000576613 IGKV1D-13A0A0B4J2D9 117 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 IFITM5A6NNB3 132 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 IGKV1-13P0DP09 117 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 FCGR2BP31994 310 aaPredicted RBP8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 TIMM50Q3ZCQ8 353 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 CNIH2Q6PI25 160 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 MFSD4AQ8N468 514 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 OR5B3Q8NH48 314 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 VN1R17PQ8TDU5 208 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 C2CD4CQ8TF44 421 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 BSCL2Q96G97 398 aaPredicted RBP8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 RARRES2Q99969 163 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 COMMD5Q9GZQ3 224 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 ATG5Q9H1Y0 275 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 DCSTAMPQ9H295 470 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 C11orf68Q9H3H3 251 aaKnown RBP8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 FBXL17Q9UF56 701 aa8.59□□□□□ -1.03
CTDNEP1-212ENST00000576613 TRAV1-2A0A0B4J238 106 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 IGLC7A0M8Q6 106 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 OR2T8A6NH00 312 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 CGB1A6NKQ9 187 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 MPTX1A8MV57 137 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 NDUFA4O00483 81 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 S1PR2O95136 353 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 RPA2P15927 270 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 MYL9P24844 172 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 CMC4P56277 68 aaPredicted RBP8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 OR10A3P58181 314 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 BRWD1-AS2P59051 145 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 OR2B8PP59922 312 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 NANOS2P60321 138 aaKnown RBP8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 EIF4EBP1Q13541 118 aaPredicted RBP8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 RCN1Q15293 331 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 HACD4Q5VWC8 232 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 SPSB3Q6PJ21 355 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 CD300LFQ8TDQ1 290 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 C20orf24Q9BUV8 137 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 CSTL1Q9H114 145 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 ELF5Q9UKW6 265 aaPredicted RBP8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 TPRKBQ9Y3C4 175 aa8.58□□□□□ -1.04
CTDNEP1-212ENST00000576613 K7EMT4 169 aa8.57□□□□□ -1.04
CTDNEP1-212ENST00000576613 TAS2R31P59538 309 aa8.57□□□□□ -1.04
CTDNEP1-212ENST00000576613 CDNFQ49AH0 187 aa8.57□□□□□ -1.04
CTDNEP1-212ENST00000576613 OGFRL1Q5TC84 451 aaPredicted RBP8.57□□□□□ -1.04
CTDNEP1-212ENST00000576613 THOC7Q6I9Y2 204 aaKnown RBP8.57□□□□□ -1.04
CTDNEP1-212ENST00000576613 HSD17B13Q7Z5P4 300 aaPredicted RBP8.57□□□□□ -1.04
CTDNEP1-212ENST00000576613 APRG1Q8IVJ8 170 aa8.57□□□□□ -1.04
CTDNEP1-212ENST00000576613 SPAG16Q8N0X2 631 aa8.57□□□□□ -1.04
CTDNEP1-212ENST00000576613 GDPD1Q8N9F7 314 aa8.57□□□□□ -1.04
CTDNEP1-212ENST00000576613 ATP6V0BQ99437 205 aa8.57□□□□□ -1.04
CTDNEP1-212ENST00000576613 MGLLQ99685 303 aa8.57□□□□□ -1.04
CTDNEP1-212ENST00000576613 QTRT1Q9BXR0 403 aaKnown RBP8.57□□□□□ -1.04
CTDNEP1-212ENST00000576613 CCDC90BQ9GZT6 254 aa8.57□□□□□ -1.04
CTDNEP1-212ENST00000576613 C15orf62A8K5M9 175 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 RBFOX2O43251 390 aaKnown RBP eCLIP8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 TNFSF12O43508 249 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 RGS10O43665 173 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 SCGNO76038 276 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 CTSDP07339 412 aaPredicted RBP8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 FGF2P09038 288 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 NQO2P16083 231 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 RAB3BP20337 219 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 ADMP35318 185 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 GNG2P59768 71 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 PRR20EP86478 221 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 PRR20CP86479 221 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 PRR20DP86480 221 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 PRR20BP86481 221 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms