RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-222	ENST00000575909	OR1S1	Q8NH92	325 aa		4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	CT55	Q8WUE5	264 aa		4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	BLNK	Q8WV28	456 aa		4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	ELSPBP1	Q96BH3	223 aa		4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	ADAT3	Q96EY9	351 aa	Predicted RBP	4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	RDH12	Q96NR8	316 aa		4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	PITX2	Q99697	317 aa		4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	MRPL32	Q9BYC8	188 aa	Known RBP	4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	HEBP2	Q9Y5Z4	205 aa		4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	CDK12	Q9NYV4	1490 aa	Predicted RBP	4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	RLF	Q13129	1914 aa		4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	CACNA1S	Q13698	1873 aa		4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	AGRN	O00468	2067 aa		4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	ABCA9	Q8IUA7	1624 aa		4.28	□□□□□ -1.72
TOM1L1-222	ENST00000575909	MYH9	P35579	1960 aa	Known RBP	4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	RBFOX3	A6NFN3	312 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	OR51F1	A6NGY5	319 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909		F6UB75	175 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909		H0YJW9	148 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909		H7BYZ3	331 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	CD14	P08571	375 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	MMP7	P09237	267 aa	Predicted RBP	4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	NUDT2	P50583	147 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	GABARAPL2	P60520	117 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	BTG2	P78543	158 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	FABP5	Q01469	135 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	REG3A	Q06141	175 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	KHDC3L	Q587J8	217 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZNF684	Q5T5D7	378 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TSPO2	Q5TGU0	170 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	MRPL54	Q6P161	138 aa	Known RBP	4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	RASL11A	Q6T310	242 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TMEM150A	Q86TG1	271 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	GAPT	Q8N292	157 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	OR51A4	Q8NGJ6	313 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	OR8S1	Q8NH09	359 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	NT5C	Q8TCD5	201 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	SLC25A46	Q96AG3	418 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	STARD4	Q96DR4	205 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	PGLYRP3	Q96LB9	341 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	GABARAPL3	Q9BY60	117 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TMEM191A	Q9H0A3	160 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ATG5	Q9H1Y0	275 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZNF226	Q9NYT6	803 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	CCDC167	Q9P0B6	97 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	UQCR10	Q9UDW1	63 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	NOP16	Q9Y3C1	178 aa	Known RBP	4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	OTOF	Q9HC10	1997 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ROBO3	Q96MS0	1386 aa		4.27	□□□□□ -1.73
TOM1L1-222	ENST00000575909	BCORL1	Q5H9F3	1711 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	CDC42BPA	Q5VT25	1732 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	WDR62	O43379	1518 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	LRRC7	Q96NW7	1537 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	SIPA1L1	O43166	1804 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	PZP	P20742	1482 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TCRBV3S1	A0A5B6	114 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	RIIAD1	A6NNX1	92 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	DPM2	O94777	84 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TNF	P01375	233 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	CTSD	P07339	412 aa	Predicted RBP	4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	IGLC1	P0CG04	106 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	SPN	P16150	400 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZNF93	P35789	620 aa	Predicted RBP	4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	REG1B	P48304	166 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TAS2R46	P59540	309 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	MEF2C	Q06413	473 aa	Predicted RBP	4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	GGTLC2	Q14390	218 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	MORN3	Q6PF18	240 aa	Predicted RBP	4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	SBSN	Q6UWP8	590 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	CBLN2	Q8IUK8	224 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TMEM183A	Q8IXX5	376 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZNF433	Q8N7K0	673 aa	Predicted RBP	4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	OR10D3	Q8NH80	312 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	OR5AK2	Q8NH90	309 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	LINC00477	Q96M19	166 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	AP1S3	Q96PC3	154 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	HSD17B10	Q99714	261 aa	Known RBP	4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	THTPA	Q9BU02	230 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	VAMP8	Q9BV40	100 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	GGTLC1	Q9BX51	225 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	SLC25A31	Q9H0C2	315 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	RNASE7	Q9H1E1	156 aa	Known RBP	4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	HEBP1	Q9NRV9	189 aa		4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TRMT112	Q9UI30	125 aa	Known RBP	4.26	□□□□□ -1.73
TOM1L1-222	ENST00000575909	GGT3P	A6NGU5	568 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	CD300LB	A8K4G0	201 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	HMSD	A8MTL9	139 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZNF861P	O60384	105 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	REM1	O75628	298 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	SOD3	P08294	240 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	RPS4Y1	P22090	263 aa	Known RBP	4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZNF140	P52738	457 aa	Predicted RBP	4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	SLC25A11	Q02978	314 aa	Known RBP	4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	LOXL1	Q08397	574 aa	Predicted RBP	4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	IBA57	Q5T440	356 aa	Known RBP	4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	NXNL2	Q5VZ03	156 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	SPATA31B1P	Q5VZV4	182 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	RNF175	Q8N4F7	328 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms