RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 TRGV3P03979 118 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 RLN1P04808 185 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 OR9G9P0C7N8 305 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 PGAM2P15259 253 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 TPPP2P59282 170 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 SCGB2B2Q4G0G5 96 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 FAAP20Q6NZ36 180 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 ADAD2Q8NCV1 583 aaKnown RBP10.52□□□□□ -0.73
CIITA-210ENST00000575513 S100ZQ8WXG8 99 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 MRGPRFQ96AM1 343 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 MS4A10Q96PG2 267 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 HRASLSQ9HDD0 168 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 SLC2A9Q9NRM0 540 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 ZNF355PQ9NSJ1 428 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 ZMAT5Q9UDW3 170 aaKnown RBP10.52□□□□□ -0.73
CIITA-210ENST00000575513 SCP2D1Q9UJQ7 156 aa10.52□□□□□ -0.73
CIITA-210ENST00000575513 C13orf42A0A1B0GVH6 325 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 UPK2O00526 184 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 MPPED1O15442 326 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 HSPB1P04792 205 aaKnown RBP10.51□□□□□ -0.73
CIITA-210ENST00000575513 CTSDP07339 412 aaPredicted RBP10.51□□□□□ -0.73
CIITA-210ENST00000575513 HLA-GP17693 338 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 RPL27AP46776 148 aaKnown RBP10.51□□□□□ -0.73
CIITA-210ENST00000575513 EGFEM1PQ0D2K5 195 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 BAK1Q16611 211 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 ZNF585BQ52M93 769 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 PHLDA2Q53GA4 152 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 PDLIM3Q53GG5 364 aaPredicted RBP10.51□□□□□ -0.73
CIITA-210ENST00000575513 SSX9Q7RTT3 188 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 OR51S1Q8NGJ8 323 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 OR13C8Q8NGS7 320 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 CASTOR1Q8WTX7 329 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 DPF1Q92782 380 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 DUX3Q96PT4 197 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 SRSF8Q9BRL6 282 aaKnown RBP10.51□□□□□ -0.73
CIITA-210ENST00000575513 ZNF257Q9Y2Q1 563 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 DNAH3Q8TD57 4116 aa10.51□□□□□ -0.73
CIITA-210ENST00000575513 TRBV9A0A0B4J1U6 114 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 MARCH11A6NNE9 402 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 NPIPB5A8MRT5 1133 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 TEX22C9J3V5 150 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 LINC01619G3V211 115 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 S1PR2O95136 353 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 LPAR6P43657 344 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 PPP5CP53041 499 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 ERVK-16P61578 105 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 KLK9Q2XQG4 91 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 TRIQKQ629K1 86 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 THOC7Q6I9Y2 204 aaKnown RBP10.5□□□□□ -0.73
CIITA-210ENST00000575513 TBC1D26Q86UD7 250 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 DMBX1Q8NFW5 382 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 MARCH1Q8TCQ1 289 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 SCGB3A2Q96PL1 93 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 TMEM140Q9NV12 185 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 MCUBQ9NWR8 336 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 COA4Q9NYJ1 87 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 KLK9Q9UKQ9 250 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 GPR132Q9UNW8 380 aa10.5□□□□□ -0.73
CIITA-210ENST00000575513 FAM223BA6NKX1 122 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 B3GALNT1O75752 331 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 DHFRP00374 187 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 CRYGCP07315 174 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 IL7P13232 177 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 RPA2P15927 270 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 PI3P19957 117 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 INSL3P51460 131 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 PIGPP57054 158 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 RAB25P57735 213 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 FAM209BQ5JX69 171 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 C10orf55Q5SWW7 151 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 ZNF57Q68EA5 555 aaPredicted RBP10.49□□□□□ -0.73
CIITA-210ENST00000575513 FAM223AQ8IWN6 122 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 CCDC71LQ8N9Z2 235 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 OR5B12Q96R08 314 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 RTBDNQ9BSG5 229 aaPredicted RBP10.49□□□□□ -0.73
CIITA-210ENST00000575513 CCDC32Q9BV29 185 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 COMMD5Q9GZQ3 224 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 RANGRFQ9HD47 186 aaPredicted RBP10.49□□□□□ -0.73
CIITA-210ENST00000575513 COPZ2Q9P299 210 aa10.49□□□□□ -0.73
CIITA-210ENST00000575513 C14orf166Q9Y224 244 aaKnown RBP10.49□□□□□ -0.73
CIITA-210ENST00000575513 NAP1L6A6NFF2 107 aa10.48□□□□□ -0.73
CIITA-210ENST00000575513 E7EUB6 86 aa10.48□□□□□ -0.73
CIITA-210ENST00000575513 H0Y980 276 aa10.48□□□□□ -0.73
CIITA-210ENST00000575513 KRASP01116 189 aa10.48□□□□□ -0.73
CIITA-210ENST00000575513 APELAP0DMC3 54 aa10.48□□□□□ -0.73
CIITA-210ENST00000575513 INPP1P49441 399 aa10.48□□□□□ -0.73
CIITA-210ENST00000575513 OR2B8PP59922 312 aa10.48□□□□□ -0.73
CIITA-210ENST00000575513 C9orf66Q5T8R8 295 aa10.48□□□□□ -0.73
CIITA-210ENST00000575513 ZNF343Q6P1L6 599 aa10.48□□□□□ -0.73
CIITA-210ENST00000575513 HSD17B13Q7Z5P4 300 aaPredicted RBP10.48□□□□□ -0.73
CIITA-210ENST00000575513 NECAP1Q8NC96 275 aa10.48□□□□□ -0.73
CIITA-210ENST00000575513 FYTTD1Q96QD9 318 aaKnown RBP10.48□□□□□ -0.73
CIITA-210ENST00000575513 TSC22D3Q99576 134 aa10.48□□□□□ -0.73
CIITA-210ENST00000575513 C7orf50Q9BRJ6 194 aaKnown RBP10.48□□□□□ -0.73
CIITA-210ENST00000575513 ALX4Q9H161 411 aaPredicted RBP10.48□□□□□ -0.73
CIITA-210ENST00000575513 C5orf66Q9H5L9 145 aa10.48□□□□□ -0.73
CIITA-210ENST00000575513 FKBP11Q9NYL4 201 aa10.48□□□□□ -0.73
CIITA-210ENST00000575513 IGHV4OR15-8A0A075B7B6 117 aa10.47□□□□□ -0.73
CIITA-210ENST00000575513 A0A087WW49 117 aa10.47□□□□□ -0.73
CIITA-210ENST00000575513 TRAV3A0A0B4J244 114 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms