RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	CMTM1	Q8IZ96	169 aa		10.9	□□□□□ -0.66
EDC4-210	ENST00000575507	POC5	Q8NA72	575 aa		10.9	□□□□□ -0.66
EDC4-210	ENST00000575507	OR13C8	Q8NGS7	320 aa		10.9	□□□□□ -0.66
EDC4-210	ENST00000575507	OSR1	Q8TAX0	266 aa	Predicted RBP	10.9	□□□□□ -0.66
EDC4-210	ENST00000575507	ZNF486	Q96H40	463 aa	Predicted RBP	10.9	□□□□□ -0.66
EDC4-210	ENST00000575507	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.9	□□□□□ -0.66
EDC4-210	ENST00000575507	ZNF355P	Q9NSJ1	428 aa		10.9	□□□□□ -0.66
EDC4-210	ENST00000575507	TBC1D24	Q9ULP9	559 aa		10.9	□□□□□ -0.66
EDC4-210	ENST00000575507		E7EUB6	86 aa		10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	GPR31	O00270	319 aa		10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	RAMP3	O60896	148 aa		10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	HSPB1	P04792	205 aa	Known RBP	10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	SAA1	P0DJI8	122 aa	Predicted RBP	10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	PGAM2	P15259	253 aa		10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	S100G	P29377	79 aa		10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	GNRHR	P30968	328 aa		10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	DCTN2	Q13561	401 aa	Known RBP	10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	RBMS2	Q15434	407 aa	Known RBP	10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	TNXA	Q16473	311 aa		10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	VMA21	Q3ZAQ7	101 aa		10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	KCTD9	Q7L273	389 aa		10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	RSRP1	Q9BUV0	290 aa		10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	SLA2	Q9H6Q3	261 aa		10.89	□□□□□ -0.67
EDC4-210	ENST00000575507	DNAH3	Q8TD57	4116 aa		10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	TNFSF12	O43508	249 aa		10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	PRH1	P02810	166 aa		10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	CTSD	P07339	412 aa	Predicted RBP	10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	BTC	P35070	178 aa		10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	CBX3	Q13185	183 aa		10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	ACSM6	Q6P461	480 aa		10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	ZNF66	Q6ZN08	573 aa		10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	ZNF818P	Q6ZRF7	136 aa		10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	ADAD2	Q8NCV1	583 aa	Known RBP	10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	SRSF12	Q8WXF0	261 aa	Known RBP	10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	MRGPRF	Q96AM1	343 aa		10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	HSD17B10	Q99714	261 aa	Known RBP	10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	COPZ2	Q9P299	210 aa		10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	GPR132	Q9UNW8	380 aa		10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	C14orf166	Q9Y224	244 aa	Known RBP	10.88	□□□□□ -0.67
EDC4-210	ENST00000575507	FAM240B	A0A1B0GVZ2	78 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507		A0A1B0GW64	132 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507	ANKRD34B	A5PLL1	514 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507		H3BUA1	57 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507	BRI3	O95415	125 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507	TRBV12-3	P01733	135 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507	CCR6	P51684	374 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507	RND3	P61587	244 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507	CCDC71L	Q8N9Z2	235 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507	MARCH1	Q8TCQ1	289 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507	TCTEX1D2	Q8WW35	142 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507	TMEM68	Q96MH6	324 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507	B9D2	Q9BPU9	175 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.87	□□□□□ -0.67
EDC4-210	ENST00000575507	PRELID3B	Q9Y3B1	194 aa		10.87	□□□□□ -0.67
EDC4-210	ENST00000575507	HMX3	A6NHT5	357 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	SAP30	O75446	220 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	NDUFB6	O95139	128 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	MYOD1	P15172	320 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	INSL3	P51460	131 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	CATR1	Q13166	79 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	ZNF343	Q6P1L6	599 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	C19orf35	Q6ZS72	473 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	HAPLN4	Q86UW8	402 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	ZNF429	Q86V71	674 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	PUSL1	Q8N0Z8	303 aa	Known RBP	10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	ENKUR	Q8TC29	256 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	PHB2	Q99623	299 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	C5orf66	Q9H5L9	145 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	SLC2A9	Q9NRM0	540 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	COA4	Q9NYJ1	87 aa		10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	ZMAT5	Q9UDW3	170 aa	Known RBP	10.86	□□□□□ -0.67
EDC4-210	ENST00000575507	C13orf42	A0A1B0GVH6	325 aa		10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	TEX22	C9J3V5	150 aa		10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	PGLYRP1	O75594	196 aa	Predicted RBP	10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	IL6R	P08887	468 aa	Predicted RBP	10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	OR9G9	P0C7N8	305 aa		10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	SPN	P16150	400 aa		10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	KIR2DS2	P43631	304 aa		10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	PIGP	P57054	158 aa		10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	CD69	Q07108	199 aa		10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	KLF5	Q13887	457 aa	Predicted RBP	10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	PHLDA2	Q53GA4	152 aa		10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	IL34	Q6ZMJ4	242 aa		10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	TMEM167A	Q8TBQ9	72 aa		10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	RTBDN	Q9BSG5	229 aa	Predicted RBP	10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	RANGRF	Q9HD47	186 aa	Predicted RBP	10.85	□□□□□ -0.67
EDC4-210	ENST00000575507	TRBV9	A0A0B4J1U6	114 aa		10.84	□□□□□ -0.67
EDC4-210	ENST00000575507		A0A0G2JLM5	398 aa		10.84	□□□□□ -0.67
EDC4-210	ENST00000575507	CGB1	A6NKQ9	187 aa		10.84	□□□□□ -0.67
EDC4-210	ENST00000575507	MPPED1	O15442	326 aa		10.84	□□□□□ -0.67
EDC4-210	ENST00000575507	B3GALNT1	O75752	331 aa		10.84	□□□□□ -0.67
EDC4-210	ENST00000575507	OR2A4	O95047	310 aa		10.84	□□□□□ -0.67
EDC4-210	ENST00000575507	PTTG1	O95997	202 aa		10.84	□□□□□ -0.67
EDC4-210	ENST00000575507	TCRB	P04435	133 aa		10.84	□□□□□ -0.67
EDC4-210	ENST00000575507	PI3	P19957	117 aa		10.84	□□□□□ -0.67
EDC4-210	ENST00000575507	TAS2R31	P59538	309 aa		10.84	□□□□□ -0.67
EDC4-210	ENST00000575507	UBE2M	P61081	183 aa	Known RBP	10.84	□□□□□ -0.67
EDC4-210	ENST00000575507	SSX9	Q7RTT3	188 aa		10.84	□□□□□ -0.67
EDC4-210	ENST00000575507	MMD2	Q8IY49	270 aa		10.84	□□□□□ -0.67
EDC4-210	ENST00000575507	TTC9C	Q8N5M4	171 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms