RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 ALPK2Q86TB3 2170 aa0.62□□□□□ -2.31
CDC27-216ENST00000574304 TONSLQ96HA7 1378 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 FABP12A6NFH5 140 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 GGT3PA6NGU5 568 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 BIRC5O15392 142 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 PMP2P02689 132 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 MSMBP08118 114 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 SULT1A3P0DMM9 295 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 SULT1A4P0DMN0 295 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 RUNX1Q01196 453 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 TNFAIP8L3Q5GJ75 292 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 C10orf55Q5SWW7 151 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 C1orf194Q5T5A4 169 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 DHFR2Q86XF0 187 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 GID4Q8IVV7 300 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 OR1M1Q8NGA1 313 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 SERPINI1Q99574 410 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 DHRS9Q9BPW9 319 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 C7orf50Q9BRJ6 194 aaKnown RBP0.61□□□□□ -2.31
CDC27-216ENST00000574304 OR8D2Q9GZM6 311 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 SPACA1Q9HBV2 294 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 XAGE1AQ9HD64 81 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 PAQR5Q9NXK6 330 aaPredicted RBP0.61□□□□□ -2.31
CDC27-216ENST00000574304 BAIAP2Q9UQB8 552 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 PXMP4Q9Y6I8 212 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 GLI3P10071 1580 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 EXPH5Q8NEV8 1989 aa0.61□□□□□ -2.31
CDC27-216ENST00000574304 TRAV14DV4A0A0A6YYC5 116 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 TRBV10-2A0A0K0K1G8 114 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 SLC22A1O15245 554 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 IL3P08700 152 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 DDTP30046 118 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 CDC34P49427 236 aaPredicted RBP0.6□□□□□ -2.31
CDC27-216ENST00000574304 EIF2B2P49770 351 aaKnown RBP0.6□□□□□ -2.31
CDC27-216ENST00000574304 OR4D2P58180 307 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 FAM78BQ5VT40 261 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.6□□□□□ -2.31
CDC27-216ENST00000574304 SLC51BQ86UW2 128 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 ZNF565Q8N9K5 539 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 ZNF439Q8NDP4 499 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 ANKRD7Q92527 254 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 SMIM19Q96E16 107 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 WDR54Q9H977 334 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 SPANXB1Q9NS25 103 aaPredicted RBP0.6□□□□□ -2.31
CDC27-216ENST00000574304 DKKL1Q9UK85 242 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 AHNAK2Q8IVF2 5795 aa0.6□□□□□ -2.31
CDC27-216ENST00000574304 KIF15Q9NS87 1388 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 IRGMA1A4Y4 181 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 F5H768 121 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 LST1O00453 97 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 HLA-DRAP01903 254 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 ZNF345Q14585 488 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 CDK10Q15131 360 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 NDUFA5Q16718 116 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 COMMD7Q86VX2 200 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 OR7G1Q8NGA0 311 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 KCTD7Q96MP8 289 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 UPF3BQ9BZI7 483 aaKnown RBP0.59□□□□□ -2.31
CDC27-216ENST00000574304 TRABDQ9H4I3 376 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 FKBP14Q9NWM8 211 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 C15orf41Q9Y2V0 281 aa0.59□□□□□ -2.31
CDC27-216ENST00000574304 LAMB4A4D0S4 1761 aa0.58□□□□□ -2.32
CDC27-216ENST00000574304 SMARCA4P51532 1647 aa0.58□□□□□ -2.32
CDC27-216ENST00000574304 C21orf140B9A014 251 aa0.58□□□□□ -2.32
CDC27-216ENST00000574304 CCL1P22362 96 aa0.58□□□□□ -2.32
CDC27-216ENST00000574304 UBE2G2P60604 165 aa0.58□□□□□ -2.32
CDC27-216ENST00000574304 POLR2GP62487 172 aaKnown RBP eCLIP0.58□□□□□ -2.32
CDC27-216ENST00000574304 CST9Q5W186 159 aa0.58□□□□□ -2.32
CDC27-216ENST00000574304 TNFAIP8L2Q6P589 184 aaPredicted RBP0.58□□□□□ -2.32
CDC27-216ENST00000574304 C5orf46Q6UWT4 87 aa0.58□□□□□ -2.32
CDC27-216ENST00000574304 YIPF3Q9GZM5 350 aa0.58□□□□□ -2.32
CDC27-216ENST00000574304 AK3Q9UIJ7 227 aa0.58□□□□□ -2.32
CDC27-216ENST00000574304 IGHV1-69-2A0A0G2JMI3 117 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 CALUO43852 315 aaPredicted RBP0.57□□□□□ -2.32
CDC27-216ENST00000574304 TYMSP04818 313 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 OCMP0CE72 109 aaPredicted RBP0.57□□□□□ -2.32
CDC27-216ENST00000574304 RNASE3P12724 160 aaKnown RBP0.57□□□□□ -2.32
CDC27-216ENST00000574304 SKP1P63208 163 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 SUPT4H1P63272 117 aaKnown RBP0.57□□□□□ -2.32
CDC27-216ENST00000574304 TNFAIP6P98066 277 aaPredicted RBP0.57□□□□□ -2.32
CDC27-216ENST00000574304 FABP9Q0Z7S8 132 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 ZNF846Q147U1 533 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 RSU1Q15404 277 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 C12orf29Q8N999 325 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 TMEM161BQ8NDZ6 487 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 JOSD2Q8TAC2 188 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 AQP3Q92482 292 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 OR5AC2Q9NZP5 309 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 FUT9Q9Y231 359 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 POLR1DQ9Y2S0 133 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 TTC21AQ8NDW8 1320 aa0.57□□□□□ -2.32
CDC27-216ENST00000574304 OR4C45A6NMZ5 311 aa0.56□□□□□ -2.32
CDC27-216ENST00000574304 GOLGA8MH3BSY2 632 aa0.56□□□□□ -2.32
CDC27-216ENST00000574304 COCHO43405 550 aa0.56□□□□□ -2.32
CDC27-216ENST00000574304 IGHV3-7P01780 117 aa0.56□□□□□ -2.32
CDC27-216ENST00000574304 METTL15P1P0C7V9 234 aa0.56□□□□□ -2.32
CDC27-216ENST00000574304 RPS4Y1P22090 263 aaKnown RBP0.56□□□□□ -2.32
CDC27-216ENST00000574304 MAP2K4P45985 399 aa0.56□□□□□ -2.32
CDC27-216ENST00000574304 FXYD2P54710 66 aa0.56□□□□□ -2.32
CDC27-216ENST00000574304 TEX36Q5VZQ5 186 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms