RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 GRINAQ7Z429 371 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 STX19Q8N4C7 294 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 EIF4E3Q8N5X7 224 aaKnown RBP1.25□□□□□ -2.21
CHD3-217ENST00000574022 ZNF283Q8N7M2 679 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 ZNF709Q8N972 641 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 CNEP1R1Q8N9A8 125 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 ZNF439Q8NDP4 499 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 GPR119Q8TDV5 335 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 DYDC1Q8WWB3 177 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 HIST1H2BHQ93079 126 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 CYYR1Q96J86 154 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 ZNF285Q96NJ3 590 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 GPER1Q99527 375 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 HIST1H2BNQ99877 126 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 HIST1H2BMQ99879 126 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 C11orf68Q9H3H3 251 aaKnown RBP1.25□□□□□ -2.21
CHD3-217ENST00000574022 SMDT1Q9H4I9 107 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 DUSP21Q9H596 190 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 EFCAB1Q9HAE3 211 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 PARVBQ9HBI1 364 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 C8orf4Q9NR00 106 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 LYRM2Q9NU23 88 aaPredicted RBP1.25□□□□□ -2.21
CHD3-217ENST00000574022 ASF1BQ9NVP2 202 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 MED29Q9NX70 200 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 PRNDQ9UKY0 176 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 FUT9Q9Y231 359 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 NDUFAF1Q9Y375 327 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 TRPM3Q9HCF6 1732 aaPredicted RBP1.25□□□□□ -2.21
CHD3-217ENST00000574022 LTBP4Q8N2S1 1624 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 DOCK9Q9BZ29 2069 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 THADAQ6YHU6 1953 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 NEO1Q92859 1461 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 RALGAPA2Q2PPJ7 1873 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 NUP160Q12769 1436 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 DSCAML1Q8TD84 2053 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 IGLV2-18A0A075B6J9 118 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 IGHV3-73A0A0B4J1V6 119 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 IGKV6D-41A0A0C4DH26 115 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 LOC105371267A0A1B0GV96 52 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 C19orf71A6NCJ1 209 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 C17orf51A8MQB3 221 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 TSTD3H0UI37 97 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 J3QRK9 145 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 MFSD11O43934 449 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 NDUFC2O95298 119 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 SOD1P00441 154 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 IFNA10P01566 189 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 IGHV1-69P01742 117 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 C1QBP02746 253 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 SMIM17P0DL12 118 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 SMIM10L2AP0DMW4 78 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 SMIM10L2BP0DMW5 78 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 RBM11P57052 281 aaKnown RBP1.24□□□□□ -2.21
CHD3-217ENST00000574022 NCALDP61601 193 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 AP1S1P61966 158 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 GNG5P63218 68 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 HTR4Q13639 388 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 EBI3Q14213 229 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 RHEBQ15382 184 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 MOGQ16653 247 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 NOXRED1Q6NXP6 359 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 HMGN2P46Q86SG4 172 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 KRTAP11-1Q8IUC1 163 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 C12orf45Q8N5I9 185 aaPredicted RBP1.24□□□□□ -2.21
CHD3-217ENST00000574022 RNF182Q8N6D2 247 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 Q8NAQ8 132 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 OR13C4Q8NGS5 318 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 OR10K1Q8NGX5 313 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 MUC7Q8TAX7 377 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 SLC25A40Q8TBP6 338 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 SLC7A6Q92536 515 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 TOMM6Q96B49 74 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 IGF2BP2-AS1Q96M15 143 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 MIEN1Q9BRT3 115 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 TMEM70Q9BUB7 260 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 PBDC1Q9BVG4 233 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 C20orf27Q9GZN8 174 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 MIXL1Q9H2W2 232 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 XAGE1AQ9HD64 81 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 BATF3Q9NR55 127 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 ACER3Q9NUN7 267 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 TVP23BQ9NYZ1 205 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 IL36BQ9NZH7 164 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 MCTS1Q9ULC4 181 aaKnown RBP1.24□□□□□ -2.21
CHD3-217ENST00000574022 SSR3Q9UNL2 185 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 CYSLTR1Q9Y271 337 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 CACNA1SQ13698 1873 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 NLRC5Q86WI3 1866 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 SIPA1L1O43166 1804 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 KIF13BQ9NQT8 1826 aa1.24□□□□□ -2.21
CHD3-217ENST00000574022 TONSLQ96HA7 1378 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 TRBV19A0A075B6N1 114 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 IGKV1D-43A0A0B4J1Z2 117 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 TRAV4A0A0B4J268 109 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 A0A1B0GU33 70 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 LOC102725191A0A1B0GVB3 256 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 VPS37CA5D8V6 355 aaPredicted RBP1.23□□□□□ -2.21
CHD3-217ENST00000574022 CLDN25C9JDP6 229 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 H7C1C5 153 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 AIPO00170 330 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms