RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 WDR12Q9GZL7 423 aaKnown RBP9.99□□□□□ -0.81
TRAPPC1-206ENST00000573989 NAA60Q9H7X0 242 aa9.99□□□□□ -0.81
TRAPPC1-206ENST00000573989 AKIP1Q9NQ31 210 aa9.99□□□□□ -0.81
TRAPPC1-206ENST00000573989 DHFRP00374 187 aa9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 PF4P02776 101 aa9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 AKR1C2P52895 323 aa9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 SSBP2P81877 361 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 RBMS2Q15434 407 aaKnown RBP9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 HIST2H2BDQ6DRA6 164 aa9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 KLHL30-AS1Q8NEE0 82 aa9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 RNASE11Q8TAA1 199 aaKnown RBP9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 FAM110DQ8TAY7 271 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 SEC22AQ96IW7 307 aa9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 UBE2E2Q96LR5 201 aa9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 FYTTD1Q96QD9 318 aaKnown RBP9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 TP53RKQ96S44 253 aa9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 SDHCQ99643 169 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 TMEM222Q9H0R3 208 aa9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 COA4Q9NYJ1 87 aa9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 PRNDQ9UKY0 176 aa9.98□□□□□ -0.81
TRAPPC1-206ENST00000573989 CRYM-AS1A6NIL9 109 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 ADARB2-AS1A8MUL3 147 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 RBMXL2O75526 392 aaKnown RBP9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 TRGV3P03979 118 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 IL6RP08887 468 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 OR5AC1P0C628 307 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 OR9G9P0C7N8 305 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 AKR1C4P17516 323 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 UCP1P25874 307 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 TPPP2P59282 170 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 ZNF846Q147U1 533 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 LCNL1Q6ZST4 164 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 MRPL41Q8IXM3 137 aaKnown RBP9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 OR5T1Q8NG75 326 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 OR4A16Q8NH70 328 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 C4orf3Q8WVX3 66 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 RRNAD1Q96FB5 475 aaKnown RBP9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 SRSF8Q9BRL6 282 aaKnown RBP9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 VSIG4Q9Y279 399 aa9.97□□□□□ -0.81
TRAPPC1-206ENST00000573989 A0A0G2JLM5 398 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 LINC00854A0A1B0GVQ3 168 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 BRI3O95415 125 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 TSPAN15O95858 294 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 APELAP0DMC3 54 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 SRPXP78539 464 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 SP6Q3SY56 376 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 TMEM128Q5BJH2 165 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 HSD17B13Q7Z5P4 300 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 TMED4Q7Z7H5 227 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 FAM219AQ8IW50 185 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 TTC9CQ8N5M4 171 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 ZNF491Q8N8L2 437 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 OR1L8Q8NGR8 309 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 OR5B3Q8NH48 314 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 MYOZ3Q8TDC0 251 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 GALNT14Q96FL9 552 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 MS4A10Q96PG2 267 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 QTRT1Q9BXR0 403 aaKnown RBP9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 KLK15Q9H2R5 256 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 ZNF257Q9Y2Q1 563 aa9.96□□□□□ -0.82
TRAPPC1-206ENST00000573989 TRAV3A0A0B4J244 114 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 C13orf42A0A1B0GVH6 325 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 C15orf61A6NNL5 157 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 NPIPB5A8MRT5 1133 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 CYB5BO43169 146 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 SOX15O60248 233 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 CDS2O95674 445 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 TRAPPC2P0DI81 140 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 TRAPPC2BP0DI82 140 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 OR2B8PP59922 312 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 C10orf55Q5SWW7 151 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 ASPHD1Q5U4P2 390 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 C8orf86Q6ZUL3 223 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 CENPSQ8N2Z9 138 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 ADAD2Q8NCV1 583 aaKnown RBP9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 GLYATL2Q8WU03 294 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 RBPMSQ93062 196 aaKnown RBP9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 IL22RA2Q969J5 263 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 USMG5Q96IX5 58 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 TMEM56Q96MV1 263 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 PDCD10Q9BUL8 212 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 OR51B2Q9Y5P1 312 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 TRRAPQ9Y4A5 3859 aa9.95□□□□□ -0.82
TRAPPC1-206ENST00000573989 TEX50A0A1B0GTY4 177 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 HMX3A6NHT5 357 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 TEX22C9J3V5 150 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 LYRM1O43325 122 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 IGKV1-39P01597 117 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 IGKV1D-39P04432 117 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 DEFA4P12838 97 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 MYCNOSP40205 109 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 CCR6P51684 374 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 RAB25P57735 213 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 UBE2MP61081 183 aaKnown RBP9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 TMEM268Q5VZI3 342 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 HINT2Q9BX68 163 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 TMEM14BQ9NUH8 114 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 NSG2Q9Y328 171 aa9.94□□□□□ -0.82
TRAPPC1-206ENST00000573989 FAM223BA6NKX1 122 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 E7EUB6 86 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms