RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 CDX1P47902 265 aaPredicted RBP13.48□□□□□ -0.25
LITAF-212ENST00000573332 RPL23AP62750 156 aaKnown RBP13.48□□□□□ -0.25
LITAF-212ENST00000573332 SP6Q3SY56 376 aa13.48□□□□□ -0.25
LITAF-212ENST00000573332 NDUFB6O95139 128 aa13.47□□□□□ -0.25
LITAF-212ENST00000573332 RPLP1P05386 114 aaKnown RBP13.47□□□□□ -0.25
LITAF-212ENST00000573332 BTCP35070 178 aa13.47□□□□□ -0.25
LITAF-212ENST00000573332 RAB9AP51151 201 aa13.47□□□□□ -0.25
LITAF-212ENST00000573332 CCR6P51684 374 aa13.47□□□□□ -0.25
LITAF-212ENST00000573332 KIAA0141Q14154 515 aaPredicted RBP13.47□□□□□ -0.25
LITAF-212ENST00000573332 TMEM128Q5BJH2 165 aa13.47□□□□□ -0.25
LITAF-212ENST00000573332 C10orf55Q5SWW7 151 aa13.47□□□□□ -0.25
LITAF-212ENST00000573332 TMEM65Q6PI78 240 aa13.47□□□□□ -0.25
LITAF-212ENST00000573332 FAM110DQ8TAY7 271 aaPredicted RBP13.47□□□□□ -0.25
LITAF-212ENST00000573332 SLA2Q9H6Q3 261 aa13.47□□□□□ -0.25
LITAF-212ENST00000573332 LINC00854A0A1B0GVQ3 168 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 A0A1B0GW64 132 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 TEX22C9J3V5 150 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 E7EUB6 86 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 LYRM1O43325 122 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 SNAPC5O75971 98 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 OR9G9P0C7N8 305 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 P0C879 139 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 PF4V1P10720 104 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 AKR1C4P17516 323 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 OR2B8PP59922 312 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 SUPT4H1P63272 117 aaKnown RBP13.46□□□□□ -0.25
LITAF-212ENST00000573332 TRIM16LQ309B1 348 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 NSUN5P1Q3KNT7 163 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 THOC7Q6I9Y2 204 aaKnown RBP13.46□□□□□ -0.25
LITAF-212ENST00000573332 H2BFWTQ7Z2G1 175 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 TTC9CQ8N5M4 171 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 IL22RA2Q969J5 263 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 UBE2E2Q96LR5 201 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 TMEM56Q96MV1 263 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 PHB2Q99623 299 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 SRSF8Q9BRL6 282 aaKnown RBP13.46□□□□□ -0.25
LITAF-212ENST00000573332 COMMD5Q9GZQ3 224 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 KLK15Q9H2R5 256 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 FKBP11Q9NYL4 201 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 PRNDQ9UKY0 176 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 TMEM56-RWDD3S4R434 201 aa13.46□□□□□ -0.25
LITAF-212ENST00000573332 PLXNB1O43157 2135 aa13.46□□□□□ -0.26
LITAF-212ENST00000573332 CGB1A6NKQ9 187 aa13.45□□□□□ -0.26
LITAF-212ENST00000573332 IGKV1-5P01602 117 aa13.45□□□□□ -0.26
LITAF-212ENST00000573332 TMEM187Q14656 261 aa13.45□□□□□ -0.26
LITAF-212ENST00000573332 LCNL1Q6ZST4 164 aa13.45□□□□□ -0.26
LITAF-212ENST00000573332 SLC25A42Q86VD7 318 aa13.45□□□□□ -0.26
LITAF-212ENST00000573332 FAM219AQ8IW50 185 aa13.45□□□□□ -0.26
LITAF-212ENST00000573332 ZNF491Q8N8L2 437 aa13.45□□□□□ -0.26
LITAF-212ENST00000573332 OR5T1Q8NG75 326 aa13.45□□□□□ -0.26
LITAF-212ENST00000573332 OR4F17Q8NGA8 305 aa13.45□□□□□ -0.26
LITAF-212ENST00000573332 RBPMSQ93062 196 aaKnown RBP13.45□□□□□ -0.26
LITAF-212ENST00000573332 OR4F4Q96R69 305 aa13.45□□□□□ -0.26
LITAF-212ENST00000573332 TMEM14BQ9NUH8 114 aa13.45□□□□□ -0.26
LITAF-212ENST00000573332 TEX50A0A1B0GTY4 177 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 C15orf61A6NNL5 157 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 UPK1BO75841 260 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 TSPAN15O95858 294 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 ANXA3P12429 323 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 MYOD1P15172 320 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 UBE2MP61081 183 aaKnown RBP13.44□□□□□ -0.26
LITAF-212ENST00000573332 KHDC1LQ5JSQ8 128 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 TMED4Q7Z7H5 227 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 ZNF695Q8IW36 515 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 SELENOHQ8IZQ5 122 aaKnown RBP13.44□□□□□ -0.26
LITAF-212ENST00000573332 CENPSQ8N2Z9 138 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 OR1L8Q8NGR8 309 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 OR5B3Q8NH48 314 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 LHFPL5Q8TAF8 219 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 FYTTD1Q96QD9 318 aaKnown RBP13.44□□□□□ -0.26
LITAF-212ENST00000573332 TNCP24821 2201 aa13.44□□□□□ -0.26
LITAF-212ENST00000573332 TET2Q6N021 2002 aaPredicted RBP13.44□□□□□ -0.26
LITAF-212ENST00000573332 PIGBOS1A0A0B4J2F0 54 aa13.43□□□□□ -0.26
LITAF-212ENST00000573332 A0A1W2PRX2 142 aa13.43□□□□□ -0.26
LITAF-212ENST00000573332 HMX3A6NHT5 357 aa13.43□□□□□ -0.26
LITAF-212ENST00000573332 NPIPB5A8MRT5 1133 aa13.43□□□□□ -0.26
LITAF-212ENST00000573332 CRYGCP07315 174 aa13.43□□□□□ -0.26
LITAF-212ENST00000573332 AKR1C2P52895 323 aa13.43□□□□□ -0.26
LITAF-212ENST00000573332 SRPXP78539 464 aa13.43□□□□□ -0.26
LITAF-212ENST00000573332 KLK9Q2XQG4 91 aa13.43□□□□□ -0.26
LITAF-212ENST00000573332 HSD17B13Q7Z5P4 300 aaPredicted RBP13.43□□□□□ -0.26
LITAF-212ENST00000573332 ZNF429Q86V71 674 aa13.43□□□□□ -0.26
LITAF-212ENST00000573332 RRNAD1Q96FB5 475 aaKnown RBP13.43□□□□□ -0.26
LITAF-212ENST00000573332 QTRT1Q9BXR0 403 aaKnown RBP13.43□□□□□ -0.26
LITAF-212ENST00000573332 NDUFA4L2Q9NRX3 87 aa13.43□□□□□ -0.26
LITAF-212ENST00000573332 KLK9Q9UKQ9 250 aa13.43□□□□□ -0.26
LITAF-212ENST00000573332 ZNF257Q9Y2Q1 563 aa13.43□□□□□ -0.26
LITAF-212ENST00000573332 NSG2Q9Y328 171 aa13.43□□□□□ -0.26
LITAF-212ENST00000573332 TRAPPC2P0DI81 140 aa13.42□□□□□ -0.26
LITAF-212ENST00000573332 TRAPPC2BP0DI82 140 aa13.42□□□□□ -0.26
LITAF-212ENST00000573332 APELAP0DMC3 54 aa13.42□□□□□ -0.26
LITAF-212ENST00000573332 RUNX1Q01196 453 aa13.42□□□□□ -0.26
LITAF-212ENST00000573332 ASAH1Q13510 395 aa13.42□□□□□ -0.26
LITAF-212ENST00000573332 TMEM268Q5VZI3 342 aa13.42□□□□□ -0.26
LITAF-212ENST00000573332 C18orf65Q6ZTR6 163 aa13.42□□□□□ -0.26
LITAF-212ENST00000573332 OR4A16Q8NH70 328 aa13.42□□□□□ -0.26
LITAF-212ENST00000573332 C4orf3Q8WVX3 66 aa13.42□□□□□ -0.26
LITAF-212ENST00000573332 LSM10Q969L4 123 aaKnown RBP13.42□□□□□ -0.26
LITAF-212ENST00000573332 TBC1D24Q9ULP9 559 aa13.42□□□□□ -0.26
LITAF-212ENST00000573332 OR51B2Q9Y5P1 312 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms