RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 FAM216BQ8N7L0 139 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 OR2T10Q8NGZ9 312 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 ANAPC16Q96DE5 110 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 CCL13Q99616 98 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 PIEZO2Q9H5I5 2752 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 ZNF292O60281 2723 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 TRGV10A0A0A0MS01 117 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 XKRY2A2RUG3 117 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 CEACAM4O75871 244 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 MMP23AO75900 390 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 HIST1H1BP16401 226 aaKnown RBP9.23□□□□□ -0.93
RPAIN-212ENST00000573126 HNF1AP20823 631 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 RAB7AP51149 207 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 FAM78BQ5VT40 261 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 TCF23Q7RTU1 214 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 TMEM183AQ8IXX5 376 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 PCNX1Q96RV3 2341 aa9.23□□□□□ -0.93
RPAIN-212ENST00000573126 SEPSECSQ9HD40 501 aaKnown RBP9.23□□□□□ -0.93
RPAIN-212ENST00000573126 ANKRD11Q6UB99 2663 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-212ENST00000573126 PKDREJQ9NTG1 2253 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 IGLV3-9A0A075B6K5 115 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 NPY1RP25929 384 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 TMPRSS3P57727 454 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 MRPS11P82912 194 aaKnown RBP9.22□□□□□ -0.93
RPAIN-212ENST00000573126 TNFAIP6P98066 277 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-212ENST00000573126 SPATA31B1PQ5VZV4 182 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 SLC24A4Q8NFF2 622 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 FAM122AQ96E09 287 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 RNF7Q9UBF6 113 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 ACACAQ13085 2346 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 SCO2A0A1W2PP80 73 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 CA2P00918 260 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 IGHV1-46P01743 117 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 IGKV1-16P04430 117 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 STAG3L2P0CL84 134 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 STAG3L3P0CL85 134 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 STPG3Q8N7X2 389 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 NPVFQ9HCQ7 196 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 KCNIP2Q9NS61 270 aa9.22□□□□□ -0.93
RPAIN-212ENST00000573126 LSM4Q9Y4Z0 139 aaKnown RBP9.22□□□□□ -0.93
RPAIN-212ENST00000573126 ZNF729A6NN14 1252 aaPredicted RBP9.21□□□□□ -0.93
RPAIN-212ENST00000573126 GGCTO75223 188 aaKnown RBP9.21□□□□□ -0.93
RPAIN-212ENST00000573126 LY86O95711 162 aa9.21□□□□□ -0.93
RPAIN-212ENST00000573126 AMBPP02760 352 aa9.21□□□□□ -0.93
RPAIN-212ENST00000573126 IL6RP08887 468 aaPredicted RBP9.21□□□□□ -0.93
RPAIN-212ENST00000573126 KIR2DS2P43631 304 aa9.21□□□□□ -0.93
RPAIN-212ENST00000573126 OR1P1Q8NH06 330 aa9.21□□□□□ -0.93
RPAIN-212ENST00000573126 TMEM14BQ9NUH8 114 aa9.21□□□□□ -0.93
RPAIN-212ENST00000573126 IDI2-AS1Q9NZ38 188 aa9.21□□□□□ -0.93
RPAIN-212ENST00000573126 YLPM1P49750 1951 aaKnown RBP9.21□□□□□ -0.94
RPAIN-212ENST00000573126 TRGV8A0A0C4DH27 118 aa9.21□□□□□ -0.94
RPAIN-212ENST00000573126 A0A0U1RQK1 487 aa9.21□□□□□ -0.94
RPAIN-212ENST00000573126 CXorf1O96002 111 aa9.21□□□□□ -0.94
RPAIN-212ENST00000573126 HSPE1P61604 102 aaKnown RBP9.21□□□□□ -0.94
RPAIN-212ENST00000573126 CCL8P80075 99 aa9.21□□□□□ -0.94
RPAIN-212ENST00000573126 EFNB3Q15768 340 aa9.21□□□□□ -0.94
RPAIN-212ENST00000573126 STUMQ69YW2 141 aa9.21□□□□□ -0.94
RPAIN-212ENST00000573126 TEPPQ6URK8 271 aa9.21□□□□□ -0.94
RPAIN-212ENST00000573126 MOB3BQ86TA1 216 aa9.21□□□□□ -0.94
RPAIN-212ENST00000573126 ZCCHC24Q8N2G6 241 aaKnown RBP9.21□□□□□ -0.94
RPAIN-212ENST00000573126 ZCCHC14Q8WYQ9 949 aaKnown RBP9.21□□□□□ -0.94
RPAIN-212ENST00000573126 GAFA1Q96PS6 74 aa9.21□□□□□ -0.94
RPAIN-212ENST00000573126 ENY2Q9NPA8 101 aa9.21□□□□□ -0.94
RPAIN-212ENST00000573126 YTHDF2Q9Y5A9 579 aaKnown RBP9.21□□□□□ -0.94
RPAIN-212ENST00000573126 CUL9Q8IWT3 2517 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 TMPRSS2O15393 492 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 FOXH1O75593 365 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 IL3RAP26951 378 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 GATA4P43694 442 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 NUBP1P53384 320 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 SELENOVP59797 346 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 C1orf185Q5T7R7 199 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 KCNIP4Q6PIL6 250 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 RND1Q92730 232 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 PRO1933Q9H354 126 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 FOXA2Q9Y261 457 aaPredicted RBP9.2□□□□□ -0.94
RPAIN-212ENST00000573126 ACTL6BO94805 426 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 IGFBP2P18065 325 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 SRP14P37108 136 aaKnown RBP9.2□□□□□ -0.94
RPAIN-212ENST00000573126 THBS3P49746 956 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 TMEM249Q2WGJ8 235 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 ACTL10Q5JWF8 245 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 FAM222BQ8WU58 562 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 FAM216AQ8WUB2 273 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 OR51B2Q9Y5P1 312 aa9.2□□□□□ -0.94
RPAIN-212ENST00000573126 ZNF320A2RRD8 509 aa9.19□□□□□ -0.94
RPAIN-212ENST00000573126 SRRM4A7MD48 611 aaKnown RBP9.19□□□□□ -0.94
RPAIN-212ENST00000573126 Q6ZS92 163 aa9.19□□□□□ -0.94
RPAIN-212ENST00000573126 ZNF439Q8NDP4 499 aa9.19□□□□□ -0.94
RPAIN-212ENST00000573126 SGMS2Q8NHU3 365 aa9.19□□□□□ -0.94
RPAIN-212ENST00000573126 SFRP2Q96HF1 295 aa9.19□□□□□ -0.94
RPAIN-212ENST00000573126 IL19Q9UHD0 177 aa9.19□□□□□ -0.94
RPAIN-212ENST00000573126 F6UZH7 168 aa9.19□□□□□ -0.94
RPAIN-212ENST00000573126 NDUFB7P17568 137 aa9.19□□□□□ -0.94
RPAIN-212ENST00000573126 CD40P25942 277 aa9.19□□□□□ -0.94
RPAIN-212ENST00000573126 GCHFRP30047 84 aa9.19□□□□□ -0.94
RPAIN-212ENST00000573126 OR4P4Q8NGL7 312 aa9.19□□□□□ -0.94
RPAIN-212ENST00000573126 WFIKKN1Q96NZ8 548 aa9.19□□□□□ -0.94
RPAIN-212ENST00000573126 LRFN3Q9BTN0 628 aa9.19□□□□□ -0.94
RPAIN-212ENST00000573126 TP53TG5Q9Y2B4 290 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms