RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 DEFB121Q5J5C9 76 aa12.37□□□□□ -0.43
NDE1-205ENST00000572756 LPCAT3Q6P1A2 487 aa12.37□□□□□ -0.43
NDE1-205ENST00000572756 C19orf35Q6ZS72 473 aa12.37□□□□□ -0.43
NDE1-205ENST00000572756 CADM3Q8N126 398 aa12.37□□□□□ -0.43
NDE1-205ENST00000572756 NECAP1Q8NC96 275 aa12.37□□□□□ -0.43
NDE1-205ENST00000572756 FCAMRQ8WWV6 532 aa12.37□□□□□ -0.43
NDE1-205ENST00000572756 FYTTD1Q96QD9 318 aaKnown RBP12.37□□□□□ -0.43
NDE1-205ENST00000572756 HRASLSQ9HDD0 168 aa12.37□□□□□ -0.43
NDE1-205ENST00000572756 TMEM140Q9NV12 185 aa12.37□□□□□ -0.43
NDE1-205ENST00000572756 ZNF256Q9Y2P7 627 aaPredicted RBP12.37□□□□□ -0.43
NDE1-205ENST00000572756 LSM4Q9Y4Z0 139 aaKnown RBP12.37□□□□□ -0.43
NDE1-205ENST00000572756 CTRB1P17538 263 aa12.36□□□□□ -0.43
NDE1-205ENST00000572756 PSMB6P28072 239 aa12.36□□□□□ -0.43
NDE1-205ENST00000572756 OR2B8PP59922 312 aa12.36□□□□□ -0.43
NDE1-205ENST00000572756 PHLDA2Q53GA4 152 aa12.36□□□□□ -0.43
NDE1-205ENST00000572756 CTRB2Q6GPI1 263 aa12.36□□□□□ -0.43
NDE1-205ENST00000572756 LHFPL1Q86WI0 220 aa12.36□□□□□ -0.43
NDE1-205ENST00000572756 C15orf40Q8WUR7 153 aa12.36□□□□□ -0.43
NDE1-205ENST00000572756 FANCD2OSQ96PS1 177 aa12.36□□□□□ -0.43
NDE1-205ENST00000572756 FAM212BQ9NTI7 297 aaPredicted RBP12.36□□□□□ -0.43
NDE1-205ENST00000572756 IGLC7A0M8Q6 106 aa12.35□□□□□ -0.43
NDE1-205ENST00000572756 MARCH11A6NNE9 402 aa12.35□□□□□ -0.43
NDE1-205ENST00000572756 H3BMQ9 156 aa12.35□□□□□ -0.43
NDE1-205ENST00000572756 RGS5O15539 181 aa12.35□□□□□ -0.43
NDE1-205ENST00000572756 CD3DP04234 171 aa12.35□□□□□ -0.43
NDE1-205ENST00000572756 TBPP20226 339 aa12.35□□□□□ -0.43
NDE1-205ENST00000572756 LPAR6P43657 344 aa12.35□□□□□ -0.43
NDE1-205ENST00000572756 ATP5G2Q06055 141 aa12.35□□□□□ -0.43
NDE1-205ENST00000572756 DCTN2Q13561 401 aaKnown RBP12.35□□□□□ -0.43
NDE1-205ENST00000572756 EXOSC2Q13868 293 aaKnown RBP12.35□□□□□ -0.43
NDE1-205ENST00000572756 SLC38A6Q8IZM9 456 aa12.35□□□□□ -0.43
NDE1-205ENST00000572756 DMBX1Q8NFW5 382 aa12.35□□□□□ -0.43
NDE1-205ENST00000572756 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.34□□□□□ -0.43
NDE1-205ENST00000572756 GABARAPH6UMI1 98 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 BMPR1BO00238 502 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 OR2J3O76001 311 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 CD74P04233 296 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 RPA2P15927 270 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 ERVK-16P61578 105 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 C15orf32Q32M92 178 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 RNASE10Q5GAN6 216 aaKnown RBP12.34□□□□□ -0.43
NDE1-205ENST00000572756 IL34Q6ZMJ4 242 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 TBC1D26Q86UD7 250 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 ARRDC1Q8N5I2 433 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 TMEM229BQ8NBD8 167 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 ISOC1Q96CN7 298 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 B9D2Q9BPU9 175 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 SRSF8Q9BRL6 282 aaKnown RBP12.34□□□□□ -0.43
NDE1-205ENST00000572756 SLIRPQ9GZT3 109 aaKnown RBP12.34□□□□□ -0.43
NDE1-205ENST00000572756 DMRT1Q9Y5R6 373 aa12.34□□□□□ -0.43
NDE1-205ENST00000572756 DPPA5A6NC42 116 aa12.33□□□□□ -0.44
NDE1-205ENST00000572756 KRASP01116 189 aa12.33□□□□□ -0.44
NDE1-205ENST00000572756 REG1AP05451 166 aa12.33□□□□□ -0.44
NDE1-205ENST00000572756 PTBP1P26599 531 aaKnown RBP eCLIP12.33□□□□□ -0.442e-6■■■■■ 28.5
NDE1-205ENST00000572756 G6PCP35575 357 aa12.33□□□□□ -0.44
NDE1-205ENST00000572756 SYNJ2BPP57105 145 aa12.33□□□□□ -0.44
NDE1-205ENST00000572756 RND3P61587 244 aa12.33□□□□□ -0.44
NDE1-205ENST00000572756 MRPS10P82664 201 aaKnown RBP12.33□□□□□ -0.44
NDE1-205ENST00000572756 SSBP1Q04837 148 aaKnown RBP12.33□□□□□ -0.44
NDE1-205ENST00000572756 OR4D10Q8NGI6 311 aa12.33□□□□□ -0.44
NDE1-205ENST00000572756 OR9G4Q8NGQ1 327 aa12.33□□□□□ -0.44
NDE1-205ENST00000572756 OR6Q1Q8NGQ2 317 aa12.33□□□□□ -0.44
NDE1-205ENST00000572756 OR4C12Q96R67 309 aa12.33□□□□□ -0.44
NDE1-205ENST00000572756 ELOVL1Q9BW60 279 aa12.33□□□□□ -0.44
NDE1-205ENST00000572756 QTRT1Q9BXR0 403 aaKnown RBP12.33□□□□□ -0.44
NDE1-205ENST00000572756 COMMD5Q9GZQ3 224 aa12.33□□□□□ -0.44
NDE1-205ENST00000572756 FBXL7Q9UJT9 491 aa12.33□□□□□ -0.44
NDE1-205ENST00000572756 IGLV11-55A0A075B6I3 123 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 CTDSPLO15194 276 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 NDUFB8O95169 186 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 IGKV1-39P01597 117 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 IGLV1-51P01701 117 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 IGKV1D-39P04432 117 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 IFNA6P05013 189 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 SPNP16150 400 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 S100GP29377 79 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 TAS2R19P59542 299 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 RPEL1Q2QD12 228 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 FAM209BQ5JX69 171 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 THOC7Q6I9Y2 204 aaKnown RBP12.32□□□□□ -0.44
NDE1-205ENST00000572756 SMIM4Q8WVI0 70 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 ZNF486Q96H40 463 aaPredicted RBP12.32□□□□□ -0.44
NDE1-205ENST00000572756 CEPT1Q9Y6K0 416 aa12.32□□□□□ -0.44
NDE1-205ENST00000572756 TEX50A0A1B0GTY4 177 aa12.31□□□□□ -0.44
NDE1-205ENST00000572756 NOL3O60936 208 aaKnown RBP12.31□□□□□ -0.44
NDE1-205ENST00000572756 LY86O95711 162 aa12.31□□□□□ -0.44
NDE1-205ENST00000572756 DHFRP00374 187 aa12.31□□□□□ -0.44
NDE1-205ENST00000572756 HIST1H1BP16401 226 aaKnown RBP12.31□□□□□ -0.44
NDE1-205ENST00000572756 STEAP1BQ6NZ63 245 aa12.31□□□□□ -0.44
NDE1-205ENST00000572756 HAPLN4Q86UW8 402 aa12.31□□□□□ -0.44
NDE1-205ENST00000572756 OR10W1Q8NGF6 305 aa12.31□□□□□ -0.44
NDE1-205ENST00000572756 OR1L8Q8NGR8 309 aa12.31□□□□□ -0.44
NDE1-205ENST00000572756 DIRAS2Q96HU8 199 aa12.31□□□□□ -0.44
NDE1-205ENST00000572756 SEC22AQ96IW7 307 aa12.31□□□□□ -0.44
NDE1-205ENST00000572756 CCDC140Q96MF4 163 aa12.31□□□□□ -0.44
NDE1-205ENST00000572756 NXF2Q9GZY0 626 aaKnown RBP12.31□□□□□ -0.44
NDE1-205ENST00000572756 NDUFA4L2Q9NRX3 87 aa12.31□□□□□ -0.44
NDE1-205ENST00000572756 SIGLEC8Q9NYZ4 499 aa12.31□□□□□ -0.44
NDE1-205ENST00000572756 RABL2AQ9UBK7 228 aaPredicted RBP12.31□□□□□ -0.44
NDE1-205ENST00000572756 RABL2BQ9UNT1 228 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms