RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 FGF2P09038 288 aa11.22□□□□□ -0.61
LITAF-208ENST00000571627 ERVK-16P61578 105 aa11.22□□□□□ -0.61
LITAF-208ENST00000571627 RND3P61587 244 aa11.22□□□□□ -0.61
LITAF-208ENST00000571627 SCGB2B2Q4G0G5 96 aa11.22□□□□□ -0.61
LITAF-208ENST00000571627 OR4A47Q6IF82 309 aa11.22□□□□□ -0.61
LITAF-208ENST00000571627 TBC1D26Q86UD7 250 aa11.22□□□□□ -0.61
LITAF-208ENST00000571627 CADM3Q8N126 398 aa11.22□□□□□ -0.61
LITAF-208ENST00000571627 DMBX1Q8NFW5 382 aa11.22□□□□□ -0.61
LITAF-208ENST00000571627 OR4D10Q8NGI6 311 aa11.22□□□□□ -0.61
LITAF-208ENST00000571627 HRASLSQ9HDD0 168 aa11.22□□□□□ -0.61
LITAF-208ENST00000571627 C13orf42A0A1B0GVH6 325 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 ANKRD34BA5PLL1 514 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 RBMXL2O75526 392 aaKnown RBP11.21□□□□□ -0.61
LITAF-208ENST00000571627 S1PR2O95136 353 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 PRH1P02810 166 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 ZNF735P0CB33 412 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 LPAR6P43657 344 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 RPL8P62917 257 aaKnown RBP11.21□□□□□ -0.61
LITAF-208ENST00000571627 PYDC2Q56P42 97 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 DEFB121Q5J5C9 76 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 SPANXN2Q5MJ10 180 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 CCDC190Q86UF4 302 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 SLC25A42Q86VD7 318 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 ADAD2Q8NCV1 583 aaKnown RBP11.21□□□□□ -0.61
LITAF-208ENST00000571627 PRR25Q96S07 402 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 PRRT1Q99946 306 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 THAP7Q9BT49 309 aaPredicted RBP11.21□□□□□ -0.61
LITAF-208ENST00000571627 SLC2A9Q9NRM0 540 aa11.21□□□□□ -0.61
LITAF-208ENST00000571627 DPPA5A6NC42 116 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 HMX3A6NHT5 357 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 UPK2O00526 184 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 HSPB1P04792 205 aaKnown RBP11.2□□□□□ -0.62
LITAF-208ENST00000571627 IL6RP08887 468 aaPredicted RBP11.2□□□□□ -0.62
LITAF-208ENST00000571627 OR9G9P0C7N8 305 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 MYOD1P15172 320 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 HLA-GP17693 338 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 ETV6P41212 452 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 RPL27AP46776 148 aaKnown RBP11.2□□□□□ -0.62
LITAF-208ENST00000571627 PPP5CP53041 499 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 AP3S2P59780 193 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 SURF2Q15527 256 aaPredicted RBP11.2□□□□□ -0.62
LITAF-208ENST00000571627 ZNF585BQ52M93 769 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 C19orf35Q6ZS72 473 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 CCDC71LQ8N9Z2 235 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 OR4C16Q8NGL9 310 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 TMEM140Q9NV12 185 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 V9GYH0 126 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 SORL1Q92673 2214 aa11.2□□□□□ -0.62
LITAF-208ENST00000571627 A0A0G2JLM5 398 aa11.19□□□□□ -0.62
LITAF-208ENST00000571627 A0A1B0GW64 132 aa11.19□□□□□ -0.62
LITAF-208ENST00000571627 MARCH11A6NNE9 402 aa11.19□□□□□ -0.62
LITAF-208ENST00000571627 E7EUB6 86 aa11.19□□□□□ -0.62
LITAF-208ENST00000571627 SAP30O75446 220 aa11.19□□□□□ -0.62
LITAF-208ENST00000571627 CTSDP07339 412 aaPredicted RBP11.19□□□□□ -0.62
LITAF-208ENST00000571627 PIGPP57054 158 aa11.19□□□□□ -0.62
LITAF-208ENST00000571627 Q8N402 240 aa11.19□□□□□ -0.62
LITAF-208ENST00000571627 TTC9CQ8N5M4 171 aa11.19□□□□□ -0.62
LITAF-208ENST00000571627 FYTTD1Q96QD9 318 aaKnown RBP11.19□□□□□ -0.62
LITAF-208ENST00000571627 COPZ2Q9P299 210 aa11.19□□□□□ -0.62
LITAF-208ENST00000571627 SCP2D1Q9UJQ7 156 aa11.19□□□□□ -0.62
LITAF-208ENST00000571627 DNAH9Q9NYC9 4486 aa11.19□□□□□ -0.62
LITAF-208ENST00000571627 TEX22C9J3V5 150 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 B3GALNT1O75752 331 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 KRASP01116 189 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 TRBV12-3P01733 135 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 SERPINE2P07093 398 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 RPA2P15927 270 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 FAUP35544 74 aaKnown RBP11.18□□□□□ -0.62
LITAF-208ENST00000571627 ZNF45Q02386 682 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 FAAP20Q6NZ36 180 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 OR6Q1Q8NGQ2 317 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 OR13C8Q8NGS7 320 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 MARCH1Q8TCQ1 289 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 DEDD2Q8WXF8 326 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 USMG5Q96IX5 58 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 SCGB3A2Q96PL1 93 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 TSC22D3Q99576 134 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 SRSF8Q9BRL6 282 aaKnown RBP11.18□□□□□ -0.62
LITAF-208ENST00000571627 COMMD5Q9GZQ3 224 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 SLC2A8Q9NY64 477 aa11.18□□□□□ -0.62
LITAF-208ENST00000571627 C14orf166Q9Y224 244 aaKnown RBP11.18□□□□□ -0.62
LITAF-208ENST00000571627 TRAV3A0A0B4J244 114 aa11.17□□□□□ -0.62
LITAF-208ENST00000571627 H0Y980 276 aa11.17□□□□□ -0.62
LITAF-208ENST00000571627 SNAPC5O75971 98 aa11.17□□□□□ -0.62
LITAF-208ENST00000571627 PI3P19957 117 aa11.17□□□□□ -0.62
LITAF-208ENST00000571627 G6PCP35575 357 aa11.17□□□□□ -0.62
LITAF-208ENST00000571627 RHOGP84095 191 aa11.17□□□□□ -0.62
LITAF-208ENST00000571627 ZNF79Q15937 498 aa11.17□□□□□ -0.62
LITAF-208ENST00000571627 THOC7Q6I9Y2 204 aaKnown RBP11.17□□□□□ -0.62
LITAF-208ENST00000571627 TOMM5Q8N4H5 51 aa11.17□□□□□ -0.62
LITAF-208ENST00000571627 OR51S1Q8NGJ8 323 aa11.17□□□□□ -0.62
LITAF-208ENST00000571627 RANGRFQ9HD47 186 aaPredicted RBP11.17□□□□□ -0.62
LITAF-208ENST00000571627 AKIP1Q9NQ31 210 aa11.17□□□□□ -0.62
LITAF-208ENST00000571627 ZMAT5Q9UDW3 170 aaKnown RBP11.17□□□□□ -0.62
LITAF-208ENST00000571627 ZNF257Q9Y2Q1 563 aa11.17□□□□□ -0.62
LITAF-208ENST00000571627 C3orf85A0A1B0GTC6 90 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 FAM223BA6NKX1 122 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 NPIPB5A8MRT5 1133 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 ATG12O94817 140 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 LY86O95711 162 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms