RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 WRBO00258 174 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 HOXA3O43365 443 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 ACTL6BO94805 426 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 CA2P00918 260 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 IFNA17P01571 189 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 MBPP02686 304 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 MYOD1P15172 320 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 PJVKQ0ZLH3 352 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 IL15RAQ13261 267 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 TNXAQ16473 311 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 TCTE3Q8IZS6 198 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 FAM71E2Q8N5Q1 922 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 Q8N9W7 124 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 RASL11BQ9BPW5 248 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 COMMD5Q9GZQ3 224 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 MAGT1Q9H0U3 335 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 FKBP11Q9NYL4 201 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 VPREB3Q9UKI3 123 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 POMT1Q9Y6A1 747 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 FAM90A26D6RGX4 464 aa12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 MAS1LP35410 378 aa12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 TNFRSF9Q07011 255 aa12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 MRGPRG-AS1Q2M3A8 158 aa12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 TUSC1Q2TAM9 212 aa12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 AARDQ4LEZ3 155 aa12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 SPINK9Q5DT21 86 aa12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 C10orf55Q5SWW7 151 aa12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 C16orf82Q7Z2V1 217 aa12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 ZNF429Q86V71 674 aa12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 HINT2Q9BX68 163 aa12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 ZFP57Q9NU63 452 aa12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 HSPB7Q9UBY9 170 aa12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 RCL1Q9Y2P8 373 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-219ENST00000570273 NF1P21359 2839 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 CEBPZOSA8MTT3 80 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 K7EPK0 472 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 FCN1O00602 326 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 FGF16O43320 207 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 CHST1O43916 411 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 SSSCA1O60232 199 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 OPN1MWP04001 364 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 FGF2P09038 288 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 PET100P0DJ07 73 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 OPN1MW2P0DN77 364 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 OPN1MW3P0DN78 364 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 PSMB6P28072 239 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 HOXA1P49639 335 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 SPCS3P61009 180 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 HSPE1P61604 102 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 POLR2GP62487 172 aaKnown RBP eCLIP12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 FGL1Q08830 312 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 C5orf56Q8N8D9 126 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 OR1L8Q8NGR8 309 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 OR5B3Q8NH48 314 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 OR52E5Q8NH55 327 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 RBKSQ9H477 322 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 CACFD1Q9UGQ2 172 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 ZNF257Q9Y2Q1 563 aa12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 NIPBLQ6KC79 2804 aaeCLIP12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 ANK3Q12955 4377 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-219ENST00000570273 SVEP1Q4LDE5 3571 aa12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 TRAV14DV4A0A0A6YYC5 116 aa12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 TEX50A0A1B0GTY4 177 aa12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 M0QZK8 103 aa12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 MED6O75586 246 aa12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 CNIH1O95406 144 aa12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 MPC2O95563 127 aa12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 HLA-DRB1P01911 266 aa12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 IAPPP10997 89 aa12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 RPL27AP46776 148 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 COMPP49747 757 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 ID3Q02535 119 aa12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 Q5BKY6 102 aa12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 TMEM86BQ8N661 226 aa12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 MBD2Q9UBB5 411 aa12.25□□□□□ -0.45
HERPUD1-219ENST00000570273 SH2D7A6NKC9 451 aaPredicted RBP12.24□□□□□ -0.45
HERPUD1-219ENST00000570273 SYNGR2O43760 224 aa12.24□□□□□ -0.45
HERPUD1-219ENST00000570273 RLN2P04090 185 aa12.24□□□□□ -0.45
HERPUD1-219ENST00000570273 PRCDQ00LT1 54 aa12.24□□□□□ -0.45
HERPUD1-219ENST00000570273 THAP6Q8TBB0 222 aa12.24□□□□□ -0.45
HERPUD1-219ENST00000570273 DTD1Q8TEA8 209 aa12.24□□□□□ -0.45
HERPUD1-219ENST00000570273 ZNF418Q8TF45 676 aaPredicted RBP12.24□□□□□ -0.45
HERPUD1-219ENST00000570273 ABHD5Q8WTS1 349 aa12.24□□□□□ -0.45
HERPUD1-219ENST00000570273 DUX5Q96PT3 197 aa12.24□□□□□ -0.45
HERPUD1-219ENST00000570273 PLEKHA3Q9HB20 300 aa12.24□□□□□ -0.45
HERPUD1-219ENST00000570273 ENY2Q9NPA8 101 aa12.24□□□□□ -0.45
HERPUD1-219ENST00000570273 FXYD6-FXYD2A0A087WZ82 144 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 DNAJC9-AS1A6NH13 148 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 G3V3Q6 166 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 H0YIZ8 118 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 L7N2F9 121 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 DEDDO75618 318 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 PVALBP20472 110 aaPredicted RBP12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 VAMP2P63027 116 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 CX3CL1P78423 397 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 FXYD3Q14802 87 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 ZFP69Q49AA0 526 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 PDLIM3Q53GG5 364 aaPredicted RBP12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 C9orf152Q5JTZ5 239 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 C11orf87Q6NUJ2 197 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms