RNA–Protein interactions for RNA: ENST00000570086.5

CMC2-222, Transcript of C-X9-C motif containing 2, human

TSL 3

Gene CMC2, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-222	ENST00000570086	CLDN34	H7C241	214 aa		12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	ST8SIA3	O43173	380 aa		12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	CCNK	O75909	580 aa		12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	ACTL6B	O94805	426 aa		12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	NKX2-1	P43699	371 aa	Predicted RBP	12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	OR2B8P	P59922	312 aa		12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	HSPE1	P61604	102 aa	Known RBP	12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	CD83	Q01151	205 aa		12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	ID3	Q02535	119 aa		12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	PDLIM3	Q53GG5	364 aa	Predicted RBP	12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	QTRT1	Q9BXR0	403 aa	Known RBP	12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	CHIA	Q9BZP6	476 aa		12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	COMMD5	Q9GZQ3	224 aa		12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	HSPB7	Q9UBY9	170 aa		12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	OR51B2	Q9Y5P1	312 aa		12.52	□□□□□ -0.41
CMC2-222	ENST00000570086	CHST1	O43916	411 aa		12.51	□□□□□ -0.41
CMC2-222	ENST00000570086	MED6	O75586	246 aa		12.51	□□□□□ -0.41
CMC2-222	ENST00000570086	SPCS3	P61009	180 aa		12.51	□□□□□ -0.41
CMC2-222	ENST00000570086	TNFRSF9	Q07011	255 aa		12.51	□□□□□ -0.41
CMC2-222	ENST00000570086	PJVK	Q0ZLH3	352 aa		12.51	□□□□□ -0.41
CMC2-222	ENST00000570086	ZNF562	Q6V9R5	426 aa		12.51	□□□□□ -0.41
CMC2-222	ENST00000570086	OR1L8	Q8NGR8	309 aa		12.51	□□□□□ -0.41
CMC2-222	ENST00000570086	ST6GAL2	Q96JF0	529 aa		12.51	□□□□□ -0.41
CMC2-222	ENST00000570086	JMJD8	Q96S16	334 aa		12.51	□□□□□ -0.41
CMC2-222	ENST00000570086	MTOR	P42345	2549 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	MXRA5	Q9NR99	2828 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	TEX50	A0A1B0GTY4	177 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	DNAJC9-AS1	A6NH13	148 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	FCN1	O00602	326 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	CA2	P00918	260 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	IFNA17	P01571	189 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	MBP	P02686	304 aa	Predicted RBP	12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	AMY1A	P04745	511 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	COMP	P49747	757 aa	Predicted RBP	12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	FGL1	Q08830	312 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	TNXA	Q16473	311 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	CXorf66	Q5JRM2	361 aa	Predicted RBP	12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	TCTE3	Q8IZS6	198 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	PPP1R1C	Q8WVI7	109 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	CLCC1	Q96S66	551 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	RANGRF	Q9HD47	186 aa	Predicted RBP	12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	SVEP1	Q4LDE5	3571 aa		12.5	□□□□□ -0.41
CMC2-222	ENST00000570086	NSD1	Q96L73	2696 aa	Predicted RBP	12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	WRB	O00258	174 aa		12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	LY86	O95711	162 aa		12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	SCGB1D2	O95969	90 aa		12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	PET100	P0DJ07	73 aa		12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	PSMB6	P28072	239 aa		12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	RPL27A	P46776	148 aa	Known RBP	12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	HILS1	P60008	231 aa		12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	PRCD	Q00LT1	54 aa		12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	RAB32	Q13637	225 aa		12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	WDR89	Q96FK6	387 aa	Predicted RBP	12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	NEURL2	Q9BR09	285 aa		12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	SRSF8	Q9BRL6	282 aa	Known RBP	12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	ANK3	Q12955	4377 aa	Known RBP	12.49	□□□□□ -0.41
CMC2-222	ENST00000570086	FN1	P02751	2386 aa	Known RBP	12.48	□□□□□ -0.41
CMC2-222	ENST00000570086		K7EPK0	472 aa		12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	SYNGR2	O43760	224 aa		12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	CNIH1	O95406	144 aa		12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	RPL15	P61313	204 aa	Known RBP	12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	GNB1	P62873	340 aa		12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	CX3CL1	P78423	397 aa		12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	SSBP2	P81877	361 aa	Predicted RBP	12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	FXYD3	Q14802	87 aa		12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	MRPL41	Q8IXM3	137 aa	Known RBP	12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	OR2T35	Q8NGX2	323 aa		12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	SRSF12	Q8WXF0	261 aa	Known RBP	12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	ARPC1A	Q92747	370 aa		12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	NPFFR1	Q9GZQ6	430 aa		12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	NDUFA4L2	Q9NRX3	87 aa		12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	TNFRSF19	Q9NS68	423 aa		12.48	□□□□□ -0.41
CMC2-222	ENST00000570086	IGHV7-81	A0A0B4J1V7	117 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086		A0A1W2PN81	502 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	CEBPZOS	A8MTT3	80 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	INS-IGF2	F8WCM5	200 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	KCNAB3	O43448	404 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	GPR137B	O60478	399 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	PFDN1	O60925	122 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	NXPH3	O95157	252 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	MPC2	O95563	127 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	RLN2	P04090	185 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	CHRNA7	P36544	502 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	S100A10	P60903	97 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	POLR2G	P62487	172 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	LRRC37A5P	Q49AS3	106 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	CIB3	Q96Q77	187 aa	Predicted RBP	12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	RAB40C	Q96S21	281 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	RBKS	Q9H477	322 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	PLEKHA3	Q9HB20	300 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	ESM1	Q9NQ30	184 aa		12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	RCL1	Q9Y2P8	373 aa	Known RBP	12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	LSM5	Q9Y4Y9	91 aa	Known RBP	12.47	□□□□□ -0.41
CMC2-222	ENST00000570086	DEDD	O75618	318 aa		12.46	□□□□□ -0.41
CMC2-222	ENST00000570086	IGHG2	P01859	326 aa		12.46	□□□□□ -0.41
CMC2-222	ENST00000570086	RNASE1	P07998	156 aa	Known RBP	12.46	□□□□□ -0.41
CMC2-222	ENST00000570086	MYOD1	P15172	320 aa		12.46	□□□□□ -0.41
CMC2-222	ENST00000570086	PVALB	P20472	110 aa	Predicted RBP	12.46	□□□□□ -0.41
CMC2-222	ENST00000570086	HOXA1	P49639	335 aa	Predicted RBP	12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms