RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 WDR61Q9GZS3 305 aaKnown RBP4.94□□□□□ -1.62
CYLD-216ENST00000569891 PARP12Q9H0J9 701 aaKnown RBP4.94□□□□□ -1.62
CYLD-216ENST00000569891 POLEQ07864 2286 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 UBE2L5PA0A1B0GUS4 154 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 A0A1B0GW64 132 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 H3BP45 60 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 NXPH3O95157 252 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 IGKV1-39P01597 117 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 IGKV1D-39P04432 117 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 M6PRP20645 277 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 CD1BP29016 333 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 GPX4P36969 197 aaPredicted RBP4.94□□□□□ -1.62
CYLD-216ENST00000569891 QTRT1Q9BXR0 403 aaKnown RBP4.94□□□□□ -1.62
CYLD-216ENST00000569891 MANBALQ9NQG1 85 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 H0YJW9 148 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 ARG1P05089 322 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 SNRNP70P08621 437 aaKnown RBP4.94□□□□□ -1.62
CYLD-216ENST00000569891 P0C879 139 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 PSMB3P49720 205 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 BPIFB3P59826 476 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 SELENOTP62341 195 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 RELBQ01201 579 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 TEPPQ6URK8 271 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 LYPD2Q6UXB3 125 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 ZNF525Q8N782 197 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 FAM168AQ92567 244 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 NABP2Q9BQ15 211 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 SEC11CQ9BY50 192 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 MRPL20Q9BYC9 149 aaKnown RBP4.94□□□□□ -1.62
CYLD-216ENST00000569891 C11orf1Q9H5F2 150 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 TRAV1-1A0A0B4J248 108 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 CTXND1A0A1B0GTU2 59 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 A8MXK9 166 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 INS-IGF2F8WCM5 200 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 CT45A6P0DMU7 189 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 CT45A5P0DMU8 189 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 CT45A7P0DMV0 189 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 GATA3P23771 443 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 RPL19P84098 196 aaKnown RBP4.93□□□□□ -1.62
CYLD-216ENST00000569891 DEFA5Q01523 94 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 SPRNQ5BIV9 151 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 ZNF383Q8NA42 475 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 OR2T10Q8NGZ9 312 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 TMEM14BQ9NUH8 114 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 THYN1Q9P016 225 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 SHANK1Q9Y566 2161 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 CHD3Q12873 2000 aaKnown RBP4.93□□□□□ -1.62
CYLD-216ENST00000569891 RNASEK-C17orf49H0YIS7 233 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 APOC3P02656 99 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 TFF1P04155 84 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 SLC25A16P16260 332 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 COX7A1P24310 79 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 GRNP28799 593 aaKnown RBP4.93□□□□□ -1.62
CYLD-216ENST00000569891 RPL27AP46776 148 aaKnown RBP4.93□□□□□ -1.62
CYLD-216ENST00000569891 SSX2Q16385 188 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 ZNF787Q6DD87 383 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 BTNL8Q6UX41 500 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 SFT2D1Q8WV19 159 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 GPHA2Q96T91 129 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 A0A1W2PPE3 182 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 BUB1B-PAK6H3BSN5 160 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 FAM106CPP0CH98 169 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 RHOBP62745 196 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 GUK1Q16774 197 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 C2orf83Q53S99 150 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 KHDC3LQ587J8 217 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 OR11H6Q8NGC7 330 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 OR1L4Q8NGR5 311 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 CTSZQ9UBR2 303 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 HUWE1Q7Z6Z7 4374 aaKnown RBP4.93□□□□□ -1.62
CYLD-216ENST00000569891 LY6G5BQ8NDX9 201 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 ABHD5Q8WTS1 349 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 BTF3L4Q96K17 158 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 OR4C12Q96R67 309 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 PFDN5Q99471 154 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 P2RX4Q99571 388 aa4.93□□□□□ -1.62
CYLD-216ENST00000569891 ITPR2Q14571 2701 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 A0A0G2JRQ6 117 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 TMEM218A2RU14 115 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 SLC31A2O15432 143 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 CNIH1O95406 144 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 ATP5J2P56134 94 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 SOHLH1Q5JUK2 328 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 PNKDQ8N490 385 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 LEAP2Q969E1 77 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 GAR1Q9NY12 217 aaKnown RBP4.92□□□□□ -1.62
CYLD-216ENST00000569891 SOD3P08294 240 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 OR9G9P0C7N8 305 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 SAA1P0DJI8 122 aaPredicted RBP4.92□□□□□ -1.62
CYLD-216ENST00000569891 IGFBP2P18065 325 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 OPRK1P41145 380 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 PAX9P55771 341 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 HES1Q14469 280 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 FAM74A3Q4VXF1 159 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 FFAR4Q5NUL3 377 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 TPTE2P1Q5T6R2 138 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 Q6ZRM9 215 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 UHRF2Q96PU4 802 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 SLC35B3Q9H1N7 401 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 SPTBN2O15020 2390 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms