RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 UQCC1Q9NVA1 299 aa5.55□□□□□ -1.52
SMG1-217ENST00000569764 CLCF1Q9UBD9 225 aa5.55□□□□□ -1.52
SMG1-217ENST00000569764 ERG28Q9UKR5 140 aa5.55□□□□□ -1.52
SMG1-217ENST00000569764 ZNF292O60281 2723 aa5.55□□□□□ -1.52
SMG1-217ENST00000569764 SDK2Q58EX2 2172 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 C1QL1O75973 258 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 RAB5AP20339 215 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 IL2RGP31785 369 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 PPP1CBP62140 327 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 ZNF117Q03924 483 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 EDDM3AQ14507 147 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 CD226Q15762 336 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 Q96M66 194 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 NOX4Q9NPH5 578 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 CA10Q9NS85 328 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 PCSK5Q92824 1860 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 GABRPO00591 440 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 IGHV2-5P01817 119 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 MMP7P09237 267 aaPredicted RBP5.54□□□□□ -1.52
SMG1-217ENST00000569764 GCSHP23434 173 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 UBA52P62987 128 aaKnown RBP5.54□□□□□ -1.52
SMG1-217ENST00000569764 PLGLAQ15195 96 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 CD300LDQ6UXZ3 194 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 TMEM99Q8N816 258 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 NUP37Q8NFH4 326 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 SLIRPQ9GZT3 109 aaKnown RBP5.54□□□□□ -1.52
SMG1-217ENST00000569764 LYRM2Q9NU23 88 aaPredicted RBP5.54□□□□□ -1.52
SMG1-217ENST00000569764 ST3GAL6Q9Y274 331 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 ZGRF1Q86YA3 2104 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 IGF1P05019 195 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 LHX2P50458 406 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 LOXL1Q08397 574 aaPredicted RBP5.54□□□□□ -1.52
SMG1-217ENST00000569764 ZNF154Q13106 437 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 NHLRC3Q5JS37 347 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 ZNF324BQ6AW86 544 aaPredicted RBP5.54□□□□□ -1.52
SMG1-217ENST00000569764 GALNT14Q96FL9 552 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 ZC2HC1AQ96GY0 325 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 C19orf24Q9BVV8 132 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 SIGLEC9Q9Y336 463 aa5.54□□□□□ -1.52
SMG1-217ENST00000569764 SIRT4Q9Y6E7 314 aaPredicted RBP5.54□□□□□ -1.52
SMG1-217ENST00000569764 NAV3Q8IVL0 2385 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 FLNBO75369 2602 aaKnown RBP5.53□□□□□ -1.52
SMG1-217ENST00000569764 A0A0B4J2E0 115 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 A0A1B0GX12 115 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 GAGE12BA1L429 117 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 CD37P11049 281 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 CXCL3P19876 107 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 FMODQ06828 376 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 CDSNQ15517 529 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 TMEM244Q5VVB8 128 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 OLFML2AQ68BL7 652 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 PQLC2Q6ZP29 291 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 HIST2H3AQ71DI3 136 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 OR4X2Q8NGF9 303 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 OR51A2Q8NGJ7 313 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 TRAV27A0A087WT01 109 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 A0A0D9SG52 128 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 A0A1B0GU03 582 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 A0A1W2PNU3 283 aaPredicted RBP5.53□□□□□ -1.52
SMG1-217ENST00000569764 C5orf49A4QMS7 147 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 CTSDP07339 412 aaPredicted RBP5.53□□□□□ -1.52
SMG1-217ENST00000569764 RPS20P60866 119 aaKnown RBP5.53□□□□□ -1.52
SMG1-217ENST00000569764 SNRPGP62308 76 aaKnown RBP5.53□□□□□ -1.52
SMG1-217ENST00000569764 CR1LQ2VPA4 569 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 TMEM200BQ69YZ2 307 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 HRCT1Q6UXD1 115 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 STAC2Q6ZMT1 411 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 OR52E2Q8NGJ4 325 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 C11orf45Q8TAV5 145 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 THEM6Q8WUY1 208 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 NRIP2Q9BQI9 281 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 TSSK6Q9BXA6 273 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 GPR35Q9HC97 309 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 IDI2-AS1Q9NZ38 188 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 OR51B2Q9Y5P1 312 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 hADV38S2A0JD32 116 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 J3KT08 172 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 MMP23AO75900 390 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 RPS25P62851 125 aaKnown RBP5.53□□□□□ -1.52
SMG1-217ENST00000569764 RPS27AP62979 156 aaKnown RBP5.53□□□□□ -1.52
SMG1-217ENST00000569764 AKR1C1Q04828 323 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 CD300EQ496F6 205 aaPredicted RBP5.53□□□□□ -1.52
SMG1-217ENST00000569764 ZNF433Q8N7K0 673 aaPredicted RBP5.53□□□□□ -1.52
SMG1-217ENST00000569764 TPRX1Q8N7U7 411 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 STARD4Q96DR4 205 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 SPACA5Q96QH8 159 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 HSPB9Q9BQS6 159 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 SPRR3Q9UBC9 169 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 MPC1Q9Y5U8 109 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 FREM3P0C091 2139 aa5.53□□□□□ -1.52
SMG1-217ENST00000569764 MEGF11A6BM72 1044 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 H3BTX0 84 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 LGALSLQ3ZCW2 172 aaPredicted RBP5.52□□□□□ -1.53
SMG1-217ENST00000569764 LYPD4Q6UWN0 246 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 SLC35E3Q7Z769 313 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 MRPL55Q7Z7F7 128 aaKnown RBP5.52□□□□□ -1.53
SMG1-217ENST00000569764 OR5AU1Q8NGC0 362 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 GPR82Q96P67 336 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 CIB3Q96Q77 187 aaPredicted RBP5.52□□□□□ -1.53
SMG1-217ENST00000569764 SULT4A1Q9BR01 284 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms