RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 RPEL1Q2QD12 228 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 ZFAND6Q6FIF0 208 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 MMD2Q8IY49 270 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 ZBTB34Q8NCN2 500 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 GPX8Q8TED1 209 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 FANCD2OSQ96PS1 177 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 SLC5A7Q9GZV3 580 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 WFDC10AQ9H1F0 79 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 TAS2R8Q9NYW2 309 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 S4R3C0 116 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 FAM223BA6NKX1 122 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 ZNF785A8K8V0 405 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 SULT1C2O00338 296 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 MPPED1O15442 326 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 KBTBD11O94819 623 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 RCVRNP35243 200 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 CATR1Q13166 79 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 C15orf32Q32M92 178 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 LINC00322Q6ZN03 302 aaPredicted RBP10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 TMEM17Q86X19 198 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 FAM223AQ8IWN6 122 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 SGPP2Q8IWX5 399 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 MFSD4AQ8N468 514 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 TMEM167AQ8TBQ9 72 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 C15orf40Q8WUR7 153 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 CCDC140Q96MF4 163 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 ZMAT4Q9H898 229 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 CCL28Q9NRJ3 127 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 EXTL2Q9UBQ6 330 aa10.46□□□□□ -0.73
GTF3C1-211ENST00000569653 RGS5O15539 181 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 TNFSF12O43508 249 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 TPPPO94811 219 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 NDUFB8O95169 186 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 IGHV3-23P01764 117 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 PMP2P02689 132 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 ZNF735P0CB33 412 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 LYL1P12980 280 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 HRH1P35367 487 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 RFX2P48378 723 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 ATP5G2Q06055 141 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 CD300EQ496F6 205 aaPredicted RBP10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 DHRS11Q6UWP2 260 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 NECAP1Q8NC96 275 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 VSTM2AQ8TAG5 236 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 CACNG8Q8WXS5 425 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 DGCR14Q96DF8 476 aaKnown RBP10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 ABHD1Q96SE0 405 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 SPIN2AQ99865 258 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 SPIN2BQ9BPZ2 258 aa10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 ZNF2Q9BSG1 426 aaPredicted RBP10.45□□□□□ -0.74
GTF3C1-211ENST00000569653 TRAV3A0A0B4J244 114 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 A6NHS1 94 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 H0Y980 276 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 ACTL6BO94805 426 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 CD7P09564 240 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 HLA-DMAP28067 261 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 KLK9Q2XQG4 91 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 ZNF818PQ6ZRF7 136 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 Q8N402 240 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 OR6F1Q8NGZ6 308 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 MCFD2Q8NI22 146 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 MOB3AQ96BX8 217 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 FYTTD1Q96QD9 318 aaKnown RBP10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 OR2A7Q96R45 310 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 AIFM2Q9BRQ8 373 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 PLEKHA3Q9HB20 300 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 NDUFA13Q9P0J0 144 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 KLK9Q9UKQ9 250 aa10.44□□□□□ -0.74
GTF3C1-211ENST00000569653 LCE6AA0A183 80 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 RBMY1BA6NDE4 496 aaKnown RBP10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 RBMY1EA6NEQ0 496 aaKnown RBP10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 C2orf70A6NJV1 201 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 NPIPB5A8MRT5 1133 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 RBFOX2O43251 390 aaKnown RBP eCLIP10.43□□□□□ -0.742e-8■□□□□ 10.9
GTF3C1-211ENST00000569653 OR2C1O95371 312 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 HRASP01112 189 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 REG1AP05451 166 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 CRYGCP07315 174 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 RBMY1DP0C7P1 496 aaKnown RBP10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 RPL27AP46776 148 aaKnown RBP10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 TSPAN5P62079 268 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 DEFB114Q30KQ6 69 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 AADACL3Q5VUY0 350 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 LCN12Q6JVE5 192 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 SSX9Q7RTT3 188 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 LYSMD2Q8IV50 215 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 CMTM1Q8IZ96 169 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 SPAG16Q8N0X2 631 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 CD300LFQ8TDQ1 290 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 FAM110AQ9BQ89 295 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 C6orf62Q9GZU0 229 aaPredicted RBP10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 FXYD6Q9H0Q3 95 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 SLC2A9Q9NRM0 540 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 FBXL7Q9UJT9 491 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 ZNF257Q9Y2Q1 563 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 BIRC6Q9NR09 4857 aa10.43□□□□□ -0.74
GTF3C1-211ENST00000569653 ALMS1Q8TCU4 4167 aa10.42□□□□□ -0.74
GTF3C1-211ENST00000569653 FOLR2P14207 255 aa10.42□□□□□ -0.74
GTF3C1-211ENST00000569653 CTRB1P17538 263 aa10.42□□□□□ -0.74
GTF3C1-211ENST00000569653 TNFSF8P32971 234 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms