RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 AURKAIP1Q9NWT8 199 aaPredicted RBP6.98□□□□□ -1.29
GTF3C1-210ENST00000569394 SELENOKQ9Y6D0 94 aa6.98□□□□□ -1.29
GTF3C1-210ENST00000569394 TNCP24821 2201 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 IGHV3-21A0A0B4J1V1 117 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 LINC00854A0A1B0GVQ3 168 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 A0A1B0GW64 132 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 UPK2O00526 184 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 CREBL2O60519 120 aaPredicted RBP6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 LY86O95711 162 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 LGALS1P09382 135 aaKnown RBP6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 NQO2P16083 231 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 HLA-GP17693 338 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 S100A5P33763 92 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 ECI1P42126 302 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 CRIP2P52943 208 aaPredicted RBP6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 PIGPP57054 158 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 TAS2R31P59538 309 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 RHOGP84095 191 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 ZNF45Q02386 682 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 ZNF585BQ52M93 769 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 SPINK9Q5DT21 86 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 VAX1Q5SQQ9 334 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 SLC38A6Q8IZM9 456 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 TCTEX1D1Q8N7M0 179 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 ADAD2Q8NCV1 583 aaKnown RBP6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 OR4C16Q8NGL9 310 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 OR13C8Q8NGS7 320 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 VSTM2AQ8TAG5 236 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 TMEM167AQ8TBQ9 72 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 MYOZ3Q8TDC0 251 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 BORCS5Q969J3 196 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 SPIN2AQ99865 258 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 SPIN2BQ9BPZ2 258 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 COMMD5Q9GZQ3 224 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 SLA2Q9H6Q3 261 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 AKIP1Q9NQ31 210 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 SLC2A9Q9NRM0 540 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 ZNF580Q9UK33 172 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 NOTCH3Q9UM47 2321 aa6.97□□□□□ -1.29
GTF3C1-210ENST00000569394 WI2-2373I1.2A0A1W2PRP0 233 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 CGB1A6NKQ9 187 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 DBX1A6NMT0 343 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 MARCH11A6NNE9 402 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 DISC1C4P0D8 188 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 TEX22C9J3V5 150 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 PPP5D1E7EU14 171 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 OVOL1O14753 267 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 SAP30O75446 220 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 HLA-AP01891 365 aaKnown RBP6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 HSPB1P04792 205 aaKnown RBP6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 OR8U8P0C7N1 319 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 AKAIN1P0CW23 69 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 DEFA4P12838 97 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 MECP2P51608 486 aaKnown RBP6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 ATP5G2Q06055 141 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 MSMO1Q15800 293 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 LPCAT3Q6P1A2 487 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 OR51S1Q8NGJ8 323 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 RNASE11Q8TAA1 199 aaKnown RBP6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 CD300LFQ8TDQ1 290 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 C15orf40Q8WUR7 153 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 SMIM4Q8WVI0 70 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 MRGPRFQ96AM1 343 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 PRR25Q96S07 402 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 THAP7Q9BT49 309 aaPredicted RBP6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 RBM38Q9H0Z9 239 aaKnown RBP6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 PLEKHA2Q9HB19 425 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 BET1LQ9NYM9 111 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 PRR13Q9NZ81 148 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 COPZ2Q9P299 210 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 FBXL7Q9UJT9 491 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 TGP01266 2768 aa6.96□□□□□ -1.3
GTF3C1-210ENST00000569394 TEX50A0A1B0GTY4 177 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 RBFOX2O43251 390 aaKnown RBP eCLIP6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 SNAPC5O75971 98 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 NDUFB8O95169 186 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 IGKV1-39P01597 117 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 CD74P04233 296 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 IGKV1D-39P04432 117 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 ZNF735P0CB33 412 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 OR13C7P0DN81 318 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 SLC6A1P30531 599 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 EXOSC2Q13868 293 aaKnown RBP6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 TRIM16LQ309B1 348 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 C9orf66Q5T8R8 295 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 H2BFWTQ7Z2G1 175 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 LHFPL1Q86WI0 220 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 ARRDC1Q8N5I2 433 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 TTC9CQ8N5M4 171 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 OR4A16Q8NH70 328 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 TERB2Q8NHR7 220 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 TMEM68Q96MH6 324 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 TP53RKQ96S44 253 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 AIFM2Q9BRQ8 373 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 MCRIP2Q9BUT9 160 aaKnown RBP6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 NXF2Q9GZY0 626 aaKnown RBP6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 C14orf166Q9Y224 244 aaKnown RBP6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 OR51B2Q9Y5P1 312 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 MEGF8Q7Z7M0 2845 aa6.95□□□□□ -1.3
GTF3C1-210ENST00000569394 NOTCH1P46531 2555 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms