RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 TRAV8-6A0A0B4J262 113 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 FAM90A2PQ658T7 463 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 LHX8Q68G74 356 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 CLEC2AQ6UVW9 174 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 TPRX1Q8N7U7 411 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 LINC00470Q9BZP3 86 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 IFI27L2Q9H2X8 130 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 GP6Q9HCN6 339 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 TMEM140Q9NV12 185 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 MT-CO3P00414 261 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 RPL11P62913 178 aaKnown RBP6.05□□□□□ -1.44
CNOT1-216ENST00000569240 NEGR1Q7Z3B1 354 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 RNF7Q9UBF6 113 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 C6orf15Q6UXA7 325 aaPredicted RBP6.05□□□□□ -1.44
CNOT1-216ENST00000569240 MOB3BQ86TA1 216 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 PLEKHB2Q96CS7 222 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 ZNF488Q96MN9 340 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 PAPPAQ13219 1627 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 LOC105371242A0A075B767 164 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 PPIAL4CA0A0B4J2A2 164 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 HIGD1CA8MV81 97 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 LGALS1P09382 135 aaKnown RBP6.05□□□□□ -1.44
CNOT1-216ENST00000569240 PPIAL4GP0DN37 164 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 IFITM1P13164 125 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 SELLP14151 372 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 WNT5AP41221 380 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 CRYBA2P53672 197 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 FXYD3Q14802 87 aa6.05□□□□□ -1.44
CNOT1-216ENST00000569240 BCL6BQ8N143 479 aaPredicted RBP6.05□□□□□ -1.44
CNOT1-216ENST00000569240 CACNA1CQ13936 2221 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 LTBP4Q8N2S1 1624 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 FOXL2P58012 376 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 SHISA6Q6ZSJ9 500 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 RFLNBQ8N5W9 214 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 ZNF775Q96BV0 537 aaPredicted RBP6.04□□□□□ -1.44
CNOT1-216ENST00000569240 SPXQ9BT56 116 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 DLL3Q9NYJ7 618 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 R4GN57 208 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 NBEAP1P0C6P0 100 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 C19orf54Q5BKX5 351 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 BATF2Q8N1L9 274 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 SCGB3A1Q96QR1 104 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 CITO14578 2027 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 NHSL1Q5SYE7 1610 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 TRBV20OR9-2A0A075B6H5 130 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 LOC389332A0A1B0GUA5 103 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 SHISA9B4DS77 424 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 ATP5G1P05496 136 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 ATP5G3P48201 142 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 ATP5G2Q06055 141 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 PHLPP1O60346 1717 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 ZG16O60844 167 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 CCL5P13501 91 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 TNXAQ16473 311 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 C9orf153Q5TBE3 101 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 FOXC2Q99958 501 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 NUP205Q92621 2012 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 TRAV2A0A0B4J234 112 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 SCO2A0A1W2PP80 73 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 RBMY1BA6NDE4 496 aaKnown RBP6.04□□□□□ -1.44
CNOT1-216ENST00000569240 RBMY1EA6NEQ0 496 aaKnown RBP6.04□□□□□ -1.44
CNOT1-216ENST00000569240 PRSS2P07478 247 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 RBMY1DP0C7P1 496 aaKnown RBP6.04□□□□□ -1.44
CNOT1-216ENST00000569240 RBMY1A1P0DJD3 496 aaKnown RBP6.04□□□□□ -1.44
CNOT1-216ENST00000569240 RBMY1CP0DJD4 496 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 SMIM10L1P0DMW3 83 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 MORN2Q502X0 79 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 SMIM10Q96HG1 83 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 HCFC1R1Q9NWW0 138 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 TMEM160Q9NX00 188 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 ECM29Q5VYK3 1845 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 PHIPQ8WWQ0 1821 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 SH2D7A6NKC9 451 aaPredicted RBP6.04□□□□□ -1.44
CNOT1-216ENST00000569240 YPEL1O60688 119 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 DRD3P35462 400 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 TDHQ8IZJ6 230 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 DEFB125Q8N687 156 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 ZPLD1Q8TCW7 415 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 YPEL2Q96QA6 119 aa6.04□□□□□ -1.44
CNOT1-216ENST00000569240 FER1L6Q2WGJ9 1857 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 TRBV6-6A0A0A6YYG2 114 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 SCTP09683 121 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 RTP5Q14D33 572 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 MUC15Q8N387 334 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 KIR3DL3Q8N743 410 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 OCC1Q8TAD7 63 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 FOXQ1Q9C009 403 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 LHFPL6Q9Y693 200 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 CXCL10P02778 98 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 TMEM14EPQ6UXP3 125 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 FAM231DQ6ZW35 169 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 ANAPC10Q9UM13 185 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 COL24A1Q17RW2 1714 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 COX8AP10176 69 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 PAX1P15863 534 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 TCTEX1D4Q5JR98 221 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 PCSK4Q6UW60 755 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 RTN4RL2Q86UN3 420 aa6.03□□□□□ -1.44
CNOT1-216ENST00000569240 SLC25A39Q9BZJ4 359 aaPredicted RBP6.03□□□□□ -1.44
CNOT1-216ENST00000569240 WFDC1Q9HC57 220 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms