RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 USMG5Q96IX5 58 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 ABHD1Q96SE0 405 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 PLEKHA2Q9HB19 425 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 FAM212BQ9NTI7 297 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-219ENST00000569136 RSL24D1Q9UHA3 163 aaKnown RBP7.14□□□□□ -1.27
CAPN3-219ENST00000569136 A3GALT2U3KPV4 340 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 TET2Q6N021 2002 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-219ENST00000569136 B5MCH6 92 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 H3BMQ9 156 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 I3L521 148 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 ZNF701M0R085 212 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-219ENST00000569136 CTDSPLO15194 276 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 OR8U8P0C7N1 319 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 SAA1P0DJI8 122 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-219ENST00000569136 F2RP25116 425 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 BRWD1-AS2P59051 145 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 POU2AF1Q16633 256 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 BEAN1Q3B7T3 259 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 FAM209BQ5JX69 171 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 AADACL3Q5VUY0 350 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 ZNF818PQ6ZRF7 136 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 SLC38A6Q8IZM9 456 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 PUSL1Q8N0Z8 303 aaKnown RBP7.13□□□□□ -1.27
CAPN3-219ENST00000569136 ARRDC1Q8N5I2 433 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 TMEM229BQ8NBD8 167 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 OR5T1Q8NG75 326 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 OR52I2Q8NH67 350 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 TMEM167AQ8TBQ9 72 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 DGCR14Q96DF8 476 aaKnown RBP7.13□□□□□ -1.27
CAPN3-219ENST00000569136 FAM103A1Q9BTL3 118 aaKnown RBP7.13□□□□□ -1.27
CAPN3-219ENST00000569136 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 ZNF355PQ9NSJ1 428 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 BET1LQ9NYM9 111 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 KLK11Q9UBX7 282 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 FBXO7Q9Y3I1 522 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 CEPT1Q9Y6K0 416 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 MEGF8Q7Z7M0 2845 aa7.13□□□□□ -1.27
CAPN3-219ENST00000569136 PLXNB1O43157 2135 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 C13orf42A0A1B0GVH6 325 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 G3V4G9 280 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 MPPED1O15442 326 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 TNFSF12O43508 249 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 SOX15O60248 233 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 CD74P04233 296 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 HSPB1P04792 205 aaKnown RBP7.12□□□□□ -1.27
CAPN3-219ENST00000569136 IGLL1P15814 213 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 TAS2R19P59542 299 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 ERVK-16P61578 105 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 RPL8P62917 257 aaKnown RBP7.12□□□□□ -1.27
CAPN3-219ENST00000569136 ZNF616Q08AN1 781 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 MEF2DQ14814 521 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 TNXAQ16473 311 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 MRGPRG-AS1Q2M3A8 158 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 RNASE10Q5GAN6 216 aaKnown RBP7.12□□□□□ -1.27
CAPN3-219ENST00000569136 C18orf65Q6ZTR6 163 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 TTC9CQ8N5M4 171 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 OR11H1Q8NG94 326 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 TERB2Q8NHR7 220 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 ZFAND1Q8TCF1 268 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 SRSF12Q8WXF0 261 aaKnown RBP7.12□□□□□ -1.27
CAPN3-219ENST00000569136 ZNF486Q96H40 463 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-219ENST00000569136 MS4A10Q96PG2 267 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 PHB2Q99623 299 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 SRSF8Q9BRL6 282 aaKnown RBP7.12□□□□□ -1.27
CAPN3-219ENST00000569136 C6orf62Q9GZU0 229 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-219ENST00000569136 NXF2Q9GZY0 626 aaKnown RBP7.12□□□□□ -1.27
CAPN3-219ENST00000569136 MIXL1Q9H2W2 232 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 ZNF430Q9H8G1 570 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-219ENST00000569136 SLC2A9Q9NRM0 540 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 COMMD9Q9P000 198 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 NDUFA13Q9P0J0 144 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 TNCP24821 2201 aa7.12□□□□□ -1.27
CAPN3-219ENST00000569136 CMYA5Q8N3K9 4069 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 FABP12A6NFH5 140 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 CCDC160A6NGH7 325 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 RAMP3O60896 148 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 KBTBD11O94819 623 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 RAB3DO95716 219 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 DHFRP00374 187 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 TRGV3P03979 118 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 CD3DP04234 171 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 IL6RP08887 468 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-219ENST00000569136 LGALS1P09382 135 aaKnown RBP7.11□□□□□ -1.27
CAPN3-219ENST00000569136 OR9G9P0C7N8 305 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 HLA-GP17693 338 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 TNFSF8P32971 234 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 INSL3P51460 131 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 TPPP2P59282 170 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 SSBP2P81877 361 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-219ENST00000569136 FHL3Q13643 280 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 IL18Q14116 193 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 PDLIM3Q53GG5 364 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-219ENST00000569136 OR2B11Q5JQS5 317 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 IDO2Q6ZQW0 420 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 LAX1Q8IWV1 398 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 VKORC1L1Q8N0U8 176 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 OR51H1Q8NH63 302 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 MCFD2Q8NI22 146 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 SOSTQ9BQB4 213 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 TINAGL1Q9GZM7 467 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms