RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 ALKQ9UM73 1620 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 SAMD9LQ8IVG5 1584 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 SCN9AQ15858 1988 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 TRAV14DV4A0A0A6YYC5 116 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 IGHV3-74A0A0B4J1X5 117 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 A0A1W2PRD5 423 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 TMEM213A2RRL7 107 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 OR2T8A6NH00 312 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 C21orf140B9A014 251 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 K7EN84 100 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 K7EPK0 472 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 APOC4-APOC2K7ER74 178 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 PIRO00625 290 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 PLPP3O14495 311 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 EEF1E1O43324 174 aaKnown RBP3.7□□□□□ -1.82
UBR1-208ENST00000569066 HCRTO43612 131 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 AGTR1P30556 359 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 DAPP51397 102 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 RUNX1Q01196 453 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 HSD52Q0P140 79 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 PDGFRLQ15198 375 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 HMGN3Q15651 99 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 ATP6AP1LQ52LC2 224 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 TIFABQ6ZNK6 161 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 TMEM251Q8N6I4 163 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 OR4D11Q8NGI4 311 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 OR52P1PQ8NH57 321 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 OR2AE1Q8NHA4 323 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 NEURL3Q96EH8 262 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 GPR82Q96P67 336 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 TCEAL2Q9H3H9 227 aaPredicted RBP3.7□□□□□ -1.82
UBR1-208ENST00000569066 MRPL16Q9NX20 251 aaKnown RBP3.7□□□□□ -1.82
UBR1-208ENST00000569066 ZNF586Q9NXT0 402 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 BTRCQ9Y297 605 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 ATAD5Q96QE3 1844 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 CCDC88CQ9P219 2028 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 DDX60Q8IY21 1712 aaKnown RBP3.7□□□□□ -1.82
UBR1-208ENST00000569066 GGT3PA6NGU5 568 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 ZNF705FA8MVS1 300 aaPredicted RBP3.7□□□□□ -1.82
UBR1-208ENST00000569066 H3BQ15 152 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 TAX1BP3O14907 124 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 ERI3O43414 337 aaKnown RBP3.7□□□□□ -1.82
UBR1-208ENST00000569066 MPDU1O75352 247 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 OR4Q2P0C623 313 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 IGLC1P0CG04 106 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 ZNF705DP0CH99 300 aaPredicted RBP3.7□□□□□ -1.82
UBR1-208ENST00000569066 ZNF705BP0CI00 300 aaPredicted RBP3.7□□□□□ -1.82
UBR1-208ENST00000569066 ZNF823P16415 610 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 FABP6P51161 128 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 CACNG7P62955 275 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 SLC25A26Q70HW3 274 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 ZNF676Q8N7Q3 588 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 PLPP5Q8NEB5 264 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 NOXO1Q8NFA2 376 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 OR52E4Q8NGH9 312 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 TMEM106AQ96A25 262 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 ZC2HC1AQ96GY0 325 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 ZNF681Q96N22 645 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 TSSK6Q9BXA6 273 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 SMIM3Q9BZL3 60 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 ATG5Q9H1Y0 275 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 TRMT112Q9UI30 125 aaKnown RBP3.7□□□□□ -1.82
UBR1-208ENST00000569066 HES2Q9Y543 173 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 DOCK9Q9BZ29 2069 aa3.7□□□□□ -1.82
UBR1-208ENST00000569066 PARP4Q9UKK3 1724 aaKnown RBP3.7□□□□□ -1.82
UBR1-208ENST00000569066 ATG2AQ2TAZ0 1938 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 KANTRA0A1W2PQU2 76 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 A0A1W2PRE2 83 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 B4DEV8 164 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 PPP5D1E7EU14 171 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 F5H5K5 113 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 ANGPTL7O43827 346 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 TMEM176BQ3YBM2 270 aaPredicted RBP3.69□□□□□ -1.82
UBR1-208ENST00000569066 FAM78BQ5VT40 261 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 TNFAIP8L2Q6P589 184 aaPredicted RBP3.69□□□□□ -1.82
UBR1-208ENST00000569066 PCP2Q8IVA1 136 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 OR5W2Q8NH69 310 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 BAALCQ8WXS3 180 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 PYURFQ96I23 114 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 EFCAB11Q9BUY7 163 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 HEBP1Q9NRV9 189 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 BET1LQ9NYM9 111 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 TAS2R8Q9NYW2 309 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 PCYT1BQ9Y5K3 369 aaPredicted RBP3.69□□□□□ -1.82
UBR1-208ENST00000569066 CPS1P31327 1500 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 NEXMIFQ5QGS0 1516 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 PIK3C2BO00750 1634 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 COL22A1Q8NFW1 1626 aaPredicted RBP3.69□□□□□ -1.82
UBR1-208ENST00000569066 A0A0J9YY10 115 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 A0A1B0GX78 115 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 A6NIN4 97 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 GNGT2O14610 69 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 SLC16A7O60669 478 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 CATP04040 527 aaKnown RBP3.69□□□□□ -1.82
UBR1-208ENST00000569066 ERGP11308 486 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 PYCR1P32322 319 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 ZNF121P58317 390 aaPredicted RBP3.69□□□□□ -1.82
UBR1-208ENST00000569066 RHOAP61586 193 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 CRADDP78560 199 aa3.69□□□□□ -1.82
UBR1-208ENST00000569066 ENDOGQ14249 297 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms