RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 S1PR2O95136 353 aa22.43■■□□□ 1.18
RAB40C-211ENST00000568586 AREGP15514 252 aa22.43■■□□□ 1.18
RAB40C-211ENST00000568586 SYNJ2BPP57105 145 aa22.43■■□□□ 1.18
RAB40C-211ENST00000568586 C15orf32Q32M92 178 aa22.43■■□□□ 1.18
RAB40C-211ENST00000568586 SRSF8Q9BRL6 282 aaKnown RBP22.43■■□□□ 1.18
RAB40C-211ENST00000568586 HRASLSQ9HDD0 168 aa22.43■■□□□ 1.18
RAB40C-211ENST00000568586 TMEM140Q9NV12 185 aa22.43■■□□□ 1.18
RAB40C-211ENST00000568586 STAB2Q8WWQ8 2551 aa22.43■■□□□ 1.18
RAB40C-211ENST00000568586 TRAV3A0A0B4J244 114 aa22.42■■□□□ 1.18
RAB40C-211ENST00000568586 BMPR1BO00238 502 aa22.42■■□□□ 1.18
RAB40C-211ENST00000568586 GPR31O00270 319 aa22.42■■□□□ 1.18
RAB40C-211ENST00000568586 OR2J3O76001 311 aa22.42■■□□□ 1.18
RAB40C-211ENST00000568586 RLN1P04808 185 aa22.42■■□□□ 1.18
RAB40C-211ENST00000568586 MYOD1P15172 320 aa22.42■■□□□ 1.18
RAB40C-211ENST00000568586 TATDN3Q17R31 274 aa22.42■■□□□ 1.18
RAB40C-211ENST00000568586 RPEL1Q2QD12 228 aa22.42■■□□□ 1.18
RAB40C-211ENST00000568586 DGCR14Q96DF8 476 aaKnown RBP22.42■■□□□ 1.18
RAB40C-211ENST00000568586 DPPA5A6NC42 116 aa22.41■■□□□ 1.18
RAB40C-211ENST00000568586 ZNF585BQ52M93 769 aa22.41■■□□□ 1.18
RAB40C-211ENST00000568586 LPCAT3Q6P1A2 487 aa22.41■■□□□ 1.18
RAB40C-211ENST00000568586 GPR141Q7Z602 305 aa22.41■■□□□ 1.18
RAB40C-211ENST00000568586 FAM212BQ9NTI7 297 aaPredicted RBP22.41■■□□□ 1.18
RAB40C-211ENST00000568586 DHFRP00374 187 aa22.4■■□□□ 1.18
RAB40C-211ENST00000568586 UCP3P55916 312 aa22.4■■□□□ 1.18
RAB40C-211ENST00000568586 C19orf35Q6ZS72 473 aa22.4■■□□□ 1.18
RAB40C-211ENST00000568586 RSRP1Q9BUV0 290 aa22.4■■□□□ 1.18
RAB40C-211ENST00000568586 FBXL7Q9UJT9 491 aa22.4■■□□□ 1.18
RAB40C-211ENST00000568586 IGLC7A0M8Q6 106 aa22.39■■□□□ 1.17
RAB40C-211ENST00000568586 CSN3P07498 182 aa22.39■■□□□ 1.17
RAB40C-211ENST00000568586 HIST1H1BP16401 226 aaKnown RBP22.39■■□□□ 1.17
RAB40C-211ENST00000568586 DMBX1Q8NFW5 382 aa22.39■■□□□ 1.17
RAB40C-211ENST00000568586 FCAMRQ8WWV6 532 aa22.39■■□□□ 1.17
RAB40C-211ENST00000568586 COMMD5Q9GZQ3 224 aa22.39■■□□□ 1.17
RAB40C-211ENST00000568586 MARCH11A6NNE9 402 aa22.38■■□□□ 1.17
RAB40C-211ENST00000568586 FAM25AB3EWG3 89 aa22.38■■□□□ 1.17
RAB40C-211ENST00000568586 FAM25CB3EWG5 89 aa22.38■■□□□ 1.17
RAB40C-211ENST00000568586 FAM25GB3EWG6 89 aa22.38■■□□□ 1.17
RAB40C-211ENST00000568586 MECP2P51608 486 aaKnown RBP22.38■■□□□ 1.17
RAB40C-211ENST00000568586 TSPAN5P62079 268 aa22.38■■□□□ 1.17
RAB40C-211ENST00000568586 IGLV11-55A0A075B6I3 123 aa22.37■■□□□ 1.17
RAB40C-211ENST00000568586 NDUFB8O95169 186 aa22.37■■□□□ 1.17
RAB40C-211ENST00000568586 LPAR6P43657 344 aa22.37■■□□□ 1.17
RAB40C-211ENST00000568586 THOC7Q6I9Y2 204 aaKnown RBP22.37■■□□□ 1.17
RAB40C-211ENST00000568586 HAPLN4Q86UW8 402 aa22.37■■□□□ 1.17
RAB40C-211ENST00000568586 C15orf40Q8WUR7 153 aa22.37■■□□□ 1.17
RAB40C-211ENST00000568586 ABHD1Q96SE0 405 aa22.37■■□□□ 1.17
RAB40C-211ENST00000568586 QTRT1Q9BXR0 403 aaKnown RBP22.37■■□□□ 1.17
RAB40C-211ENST00000568586 EXTL2Q9UBQ6 330 aa22.37■■□□□ 1.17
RAB40C-211ENST00000568586 HUWE1Q7Z6Z7 4374 aaKnown RBP22.36■■□□□ 1.17
RAB40C-211ENST00000568586 ERVK-16P61578 105 aa22.36■■□□□ 1.17
RAB40C-211ENST00000568586 Q8N1Y9 231 aa22.36■■□□□ 1.17
RAB40C-211ENST00000568586 PEMTQ9UBM1 199 aa22.36■■□□□ 1.17
RAB40C-211ENST00000568586 KLK11Q9UBX7 282 aa22.36■■□□□ 1.17
RAB40C-211ENST00000568586 MTFP1Q9UDX5 166 aa22.36■■□□□ 1.17
RAB40C-211ENST00000568586 SPCS2Q15005 226 aa22.35■■□□□ 1.17
RAB40C-211ENST00000568586 HSD17B13Q7Z5P4 300 aaPredicted RBP22.35■■□□□ 1.17
RAB40C-211ENST00000568586 SLC38A6Q8IZM9 456 aa22.35■■□□□ 1.17
RAB40C-211ENST00000568586 OR52I2Q8NH67 350 aa22.35■■□□□ 1.17
RAB40C-211ENST00000568586 CCDC140Q96MF4 163 aa22.35■■□□□ 1.17
RAB40C-211ENST00000568586 MIXL1Q9H2W2 232 aa22.35■■□□□ 1.17
RAB40C-211ENST00000568586 TEX50A0A1B0GTY4 177 aa22.34■■□□□ 1.17
RAB40C-211ENST00000568586 H0Y980 276 aa22.34■■□□□ 1.17
RAB40C-211ENST00000568586 GGCTO75223 188 aaKnown RBP22.34■■□□□ 1.17
RAB40C-211ENST00000568586 TBPP20226 339 aa22.34■■□□□ 1.17
RAB40C-211ENST00000568586 PTBP1P26599 531 aaKnown RBP eCLIP22.34■■□□□ 1.17
RAB40C-211ENST00000568586 PHLDA2Q53GA4 152 aa22.34■■□□□ 1.17
RAB40C-211ENST00000568586 BCL7BQ9BQE9 202 aa22.34■■□□□ 1.17
RAB40C-211ENST00000568586 KRASP01116 189 aa22.33■■□□□ 1.17
RAB40C-211ENST00000568586 REG1AP05451 166 aa22.33■■□□□ 1.17
RAB40C-211ENST00000568586 S100GP29377 79 aa22.33■■□□□ 1.17
RAB40C-211ENST00000568586 LHFPL1Q86WI0 220 aa22.33■■□□□ 1.17
RAB40C-211ENST00000568586 GPHB5Q86YW7 130 aa22.33■■□□□ 1.17
RAB40C-211ENST00000568586 OR1L8Q8NGR8 309 aa22.33■■□□□ 1.17
RAB40C-211ENST00000568586 THAP7Q9BT49 309 aaPredicted RBP22.33■■□□□ 1.17
RAB40C-211ENST00000568586 NDUFA4L2Q9NRX3 87 aa22.33■■□□□ 1.17
RAB40C-211ENST00000568586 M0QYG6 137 aa22.32■■□□□ 1.16
RAB40C-211ENST00000568586 LGALS9O00182 355 aa22.32■■□□□ 1.16
RAB40C-211ENST00000568586 TRAPPC2P0DI81 140 aa22.32■■□□□ 1.16
RAB40C-211ENST00000568586 TRAPPC2BP0DI82 140 aa22.32■■□□□ 1.16
RAB40C-211ENST00000568586 DEFA4P12838 97 aa22.32■■□□□ 1.16
RAB40C-211ENST00000568586 RPA2P15927 270 aa22.32■■□□□ 1.16
RAB40C-211ENST00000568586 ADAMTSL5Q6ZMM2 481 aa22.32■■□□□ 1.16
RAB40C-211ENST00000568586 TBC1D26Q86UD7 250 aa22.32■■□□□ 1.16
RAB40C-211ENST00000568586 ARRDC1Q8N5I2 433 aa22.32■■□□□ 1.16
RAB40C-211ENST00000568586 RAB2BQ8WUD1 216 aa22.32■■□□□ 1.16
RAB40C-211ENST00000568586 U3KQK5 164 aa22.32■■□□□ 1.16
RAB40C-211ENST00000568586 A8MZ25 164 aa22.31■■□□□ 1.16
RAB40C-211ENST00000568586 PPP5D1E7EU14 171 aa22.31■■□□□ 1.16
RAB40C-211ENST00000568586 G6PCP35575 357 aa22.31■■□□□ 1.16
RAB40C-211ENST00000568586 TMBIM6P55061 237 aa22.31■■□□□ 1.16
RAB40C-211ENST00000568586 OR10W1Q8NGF6 305 aa22.31■■□□□ 1.16
RAB40C-211ENST00000568586 OR2K2Q8NGT1 345 aa22.31■■□□□ 1.16
RAB40C-211ENST00000568586 EEF1AKMT3Q96AZ1 226 aa22.31■■□□□ 1.16
RAB40C-211ENST00000568586 CXorf58Q96LI9 332 aa22.31■■□□□ 1.16
RAB40C-211ENST00000568586 WWC2-AS2Q96NR7 200 aa22.31■■□□□ 1.16
RAB40C-211ENST00000568586 TRBV7-1A0A0A6YYK4 115 aa22.3■■□□□ 1.16
RAB40C-211ENST00000568586 CTDSP2O14595 271 aa22.3■■□□□ 1.16
RAB40C-211ENST00000568586 CD74P04233 296 aa22.3■■□□□ 1.16
RAB40C-211ENST00000568586 CD3DP04234 171 aa22.3■■□□□ 1.16
RAB40C-211ENST00000568586 RND3P61587 244 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms