RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 NMSQ5H8A3 153 aa12.39□□□□□ -0.43
SPG7-218ENST00000568205 C10orf55Q5SWW7 151 aa12.39□□□□□ -0.43
SPG7-218ENST00000568205 OR4A16Q8NH70 328 aa12.39□□□□□ -0.43
SPG7-218ENST00000568205 GPR146Q96CH1 333 aa12.39□□□□□ -0.43
SPG7-218ENST00000568205 GPN1Q9HCN4 374 aaPredicted RBP12.39□□□□□ -0.43
SPG7-218ENST00000568205 ZNF580Q9UK33 172 aa12.39□□□□□ -0.43
SPG7-218ENST00000568205 FBXO7Q9Y3I1 522 aa12.39□□□□□ -0.43
SPG7-218ENST00000568205 A0A0B4J293 547 aa12.38□□□□□ -0.43
SPG7-218ENST00000568205 A0A1B0GUS0 222 aa12.38□□□□□ -0.43
SPG7-218ENST00000568205 TMEM89A2RUT3 159 aa12.38□□□□□ -0.43
SPG7-218ENST00000568205 C15orf61A6NNL5 157 aa12.38□□□□□ -0.43
SPG7-218ENST00000568205 IGF1P05019 195 aa12.38□□□□□ -0.43
SPG7-218ENST00000568205 HOXB5P09067 269 aa12.38□□□□□ -0.43
SPG7-218ENST00000568205 EGR2P11161 476 aaPredicted RBP12.38□□□□□ -0.43
SPG7-218ENST00000568205 MYOD1P15172 320 aa12.38□□□□□ -0.43
SPG7-218ENST00000568205 RPL27AP46776 148 aaKnown RBP12.38□□□□□ -0.43
SPG7-218ENST00000568205 FOXL1Q12952 345 aa12.38□□□□□ -0.43
SPG7-218ENST00000568205 Q6ZRM9 215 aa12.38□□□□□ -0.43
SPG7-218ENST00000568205 C12orf45Q8N5I9 185 aaPredicted RBP12.38□□□□□ -0.43
SPG7-218ENST00000568205 SRSF12Q8WXF0 261 aaKnown RBP12.38□□□□□ -0.43
SPG7-218ENST00000568205 NOL4LQ96MY1 436 aaPredicted RBP12.38□□□□□ -0.43
SPG7-218ENST00000568205 FAM103A1Q9BTL3 118 aaKnown RBP12.38□□□□□ -0.43
SPG7-218ENST00000568205 COMMD5Q9GZQ3 224 aa12.38□□□□□ -0.43
SPG7-218ENST00000568205 TMEM14BQ9NUH8 114 aa12.38□□□□□ -0.43
SPG7-218ENST00000568205 LINC00527Q9UJ94 153 aa12.38□□□□□ -0.43
SPG7-218ENST00000568205 FOXA2Q9Y261 457 aaPredicted RBP12.38□□□□□ -0.43
SPG7-218ENST00000568205 TMED3Q9Y3Q3 217 aa12.38□□□□□ -0.43
SPG7-218ENST00000568205 DBX1A6NMT0 343 aa12.37□□□□□ -0.43
SPG7-218ENST00000568205 SNRPGP15A8MWD9 76 aa12.37□□□□□ -0.43
SPG7-218ENST00000568205 RBMXL2O75526 392 aaKnown RBP12.37□□□□□ -0.43
SPG7-218ENST00000568205 CRIP2P52943 208 aaPredicted RBP12.37□□□□□ -0.43
SPG7-218ENST00000568205 STPG2Q8N412 459 aa12.37□□□□□ -0.43
SPG7-218ENST00000568205 MINDY2Q8NBR6 621 aa12.37□□□□□ -0.43
SPG7-218ENST00000568205 SGMS2Q8NHU3 365 aa12.37□□□□□ -0.43
SPG7-218ENST00000568205 CHPT1Q8WUD6 406 aa12.37□□□□□ -0.43
SPG7-218ENST00000568205 WNT10AQ9GZT5 417 aa12.37□□□□□ -0.43
SPG7-218ENST00000568205 FKBP11Q9NYL4 201 aa12.37□□□□□ -0.43
SPG7-218ENST00000568205 CACNG5Q9UF02 275 aa12.37□□□□□ -0.43
SPG7-218ENST00000568205 RNF114Q9Y508 228 aa12.37□□□□□ -0.43
SPG7-218ENST00000568205 OR51B2Q9Y5P1 312 aa12.37□□□□□ -0.43
SPG7-218ENST00000568205 WSB1Q9Y6I7 421 aa12.37□□□□□ -0.43
SPG7-218ENST00000568205 COL6A5A8TX70 2615 aa12.37□□□□□ -0.43
SPG7-218ENST00000568205 TRAV41A0A0B4J266 112 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 TEX50A0A1B0GTY4 177 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 MSGN1A6NI15 193 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 ADAP1O75689 374 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 OPN1MWP04001 364 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 SULT1A3P0DMM9 295 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 SULT1A4P0DMN0 295 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 OPN1MW2P0DN77 364 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 OPN1MW3P0DN78 364 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 TATDN3Q17R31 274 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 ECSCRQ19T08 205 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 GGNBP1Q5YKI7 109 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 ZNF429Q86V71 674 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 UXS1Q8NBZ7 420 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 OR1L8Q8NGR8 309 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 OR5B3Q8NH48 314 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 SPIN2AQ99865 258 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 SPIN2BQ9BPZ2 258 aa12.36□□□□□ -0.43
SPG7-218ENST00000568205 QTRT1Q9BXR0 403 aaKnown RBP12.36□□□□□ -0.43
SPG7-218ENST00000568205 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.36□□□□□ -0.43
SPG7-218ENST00000568205 A0A1B0GU03 582 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 A0A1B0GW64 132 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 C7orf66A4D0T2 115 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 E7EUB6 86 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 G3V318 75 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 IFNA21P01568 189 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 PROK1P58294 105 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 TMEM267Q0VDI3 215 aaPredicted RBP12.35□□□□□ -0.43
SPG7-218ENST00000568205 SMCO1Q147U7 214 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 AARDQ4LEZ3 155 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 AWAT1Q58HT5 328 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 C19orf54Q5BKX5 351 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 THOC7Q6I9Y2 204 aaKnown RBP12.35□□□□□ -0.43
SPG7-218ENST00000568205 UNQ5815/PRO19632Q6UWF5 114 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 KLHDC1Q8N7A1 406 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 LFNGQ8NES3 379 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 FYTTD1Q96QD9 318 aaKnown RBP12.35□□□□□ -0.43
SPG7-218ENST00000568205 GON7Q9BXV9 100 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 COA4Q9NYJ1 87 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 ZNF257Q9Y2Q1 563 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 TNCP24821 2201 aa12.35□□□□□ -0.43
SPG7-218ENST00000568205 CGB1A6NKQ9 187 aa12.34□□□□□ -0.43
SPG7-218ENST00000568205 TEX22C9J3V5 150 aa12.34□□□□□ -0.43
SPG7-218ENST00000568205 ST8SIA3O43173 380 aa12.34□□□□□ -0.43
SPG7-218ENST00000568205 TRAPPC2P0DI81 140 aa12.34□□□□□ -0.43
SPG7-218ENST00000568205 TRAPPC2BP0DI82 140 aa12.34□□□□□ -0.43
SPG7-218ENST00000568205 SLC25A6P12236 298 aa12.34□□□□□ -0.43
SPG7-218ENST00000568205 HSPE1P61604 102 aaKnown RBP12.34□□□□□ -0.43
SPG7-218ENST00000568205 CFHR3Q02985 330 aa12.34□□□□□ -0.43
SPG7-218ENST00000568205 AKIRIN2Q53H80 203 aa12.34□□□□□ -0.43
SPG7-218ENST00000568205 ASPHD1Q5U4P2 390 aa12.34□□□□□ -0.43
SPG7-218ENST00000568205 TMEM68Q96MH6 324 aa12.34□□□□□ -0.43
SPG7-218ENST00000568205 HINT2Q9BX68 163 aa12.34□□□□□ -0.43
SPG7-218ENST00000568205 NDUFA4L2Q9NRX3 87 aa12.34□□□□□ -0.43
SPG7-218ENST00000568205 ALG5Q9Y673 324 aa12.34□□□□□ -0.43
SPG7-218ENST00000568205 FBN1P35555 2871 aaKnown RBP12.34□□□□□ -0.43
SPG7-218ENST00000568205 PSMB11A5LHX3 300 aa12.33□□□□□ -0.44
SPG7-218ENST00000568205 HMX3A6NHT5 357 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms