RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 DHRS2Q13268 280 aa14.11□□□□□ -0.15
COMMD4-222ENST00000568034 TCTEX1D4Q5JR98 221 aa14.11□□□□□ -0.15
COMMD4-222ENST00000568034 HIST2H2BDQ6DRA6 164 aa14.11□□□□□ -0.15
COMMD4-222ENST00000568034 ZNF329Q86UD4 541 aa14.11□□□□□ -0.15
COMMD4-222ENST00000568034 MINDY2Q8NBR6 621 aa14.11□□□□□ -0.15
COMMD4-222ENST00000568034 ENKURQ8TC29 256 aa14.11□□□□□ -0.15
COMMD4-222ENST00000568034 ALX4Q9H161 411 aaPredicted RBP14.11□□□□□ -0.15
COMMD4-222ENST00000568034 PALMDQ9NP74 551 aa14.11□□□□□ -0.15
COMMD4-222ENST00000568034 TET2Q6N021 2002 aaPredicted RBP14.1□□□□□ -0.15
COMMD4-222ENST00000568034 TRAV41A0A0B4J266 112 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 C15orf61A6NNL5 157 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 TEX22C9J3V5 150 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 SOX15O60248 233 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 H2AFB2P0C5Z0 115 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 AKR1C2P52895 323 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 OR2B8PP59922 312 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 ECSCRQ19T08 205 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 H2BFWTQ7Z2G1 175 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 LYG2Q86SG7 212 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 ZNF695Q8IW36 515 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 SLC35G3Q8N808 338 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 LRTM2Q8N967 370 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 LFNGQ8NES3 379 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 ABHD5Q8WTS1 349 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 CITED1Q99966 193 aa14.1□□□□□ -0.15
COMMD4-222ENST00000568034 A0A0B4J293 547 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 MSGN1A6NI15 193 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 ACTL6BO94805 426 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 HLA-AP01891 365 aaKnown RBP14.09□□□□□ -0.15
COMMD4-222ENST00000568034 SPNP16150 400 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 VDAC1P21796 283 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 RPL27AP46776 148 aaKnown RBP14.09□□□□□ -0.15
COMMD4-222ENST00000568034 SRPXP78539 464 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 AKIRIN2Q53H80 203 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 Q6ZRM9 215 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 LYZL2Q7Z4W2 148 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 CENPVQ7Z7K6 275 aaPredicted RBP14.09□□□□□ -0.15
COMMD4-222ENST00000568034 LGI3Q8N145 548 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 OR5AU1Q8NGC0 362 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 OR52B4Q8NGK2 314 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 CASTOR1Q8WTX7 329 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 TMEM14BQ9NUH8 114 aa14.09□□□□□ -0.15
COMMD4-222ENST00000568034 A0A0B4J2A0 478 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 ATG12O94817 140 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 IGHG4P01861 327 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 OPN1MWP04001 364 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 OPN1MW2P0DN77 364 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 OPN1MW3P0DN78 364 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 CD28P10747 220 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 RAB25P57735 213 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 NMSQ5H8A3 153 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 UNQ5815/PRO19632Q6UWF5 114 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 C11orf44Q8N8P7 122 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 LSM10Q969L4 123 aaKnown RBP14.08□□□□□ -0.16
COMMD4-222ENST00000568034 GPR146Q96CH1 333 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 SHPKQ9UHJ6 478 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 PRNDQ9UKY0 176 aa14.08□□□□□ -0.16
COMMD4-222ENST00000568034 FOXA2Q9Y261 457 aaPredicted RBP14.08□□□□□ -0.16
COMMD4-222ENST00000568034 TEX50A0A1B0GTY4 177 aa14.07□□□□□ -0.16
COMMD4-222ENST00000568034 HMX3A6NHT5 357 aa14.07□□□□□ -0.16
COMMD4-222ENST00000568034 SNAPC5O75971 98 aa14.07□□□□□ -0.16
COMMD4-222ENST00000568034 IGLV1-40P01703 118 aa14.07□□□□□ -0.16
COMMD4-222ENST00000568034 APELAP0DMC3 54 aa14.07□□□□□ -0.16
COMMD4-222ENST00000568034 SLC35B1P78383 322 aa14.07□□□□□ -0.16
COMMD4-222ENST00000568034 C4orf46Q504U0 113 aa14.07□□□□□ -0.16
COMMD4-222ENST00000568034 FAM219AQ8IW50 185 aa14.07□□□□□ -0.16
COMMD4-222ENST00000568034 C3orf56Q8N813 242 aa14.07□□□□□ -0.16
COMMD4-222ENST00000568034 RNF152Q8N8N0 203 aa14.07□□□□□ -0.16
COMMD4-222ENST00000568034 RRNAD1Q96FB5 475 aaKnown RBP14.07□□□□□ -0.16
COMMD4-222ENST00000568034 SEC22CQ9BRL7 303 aa14.07□□□□□ -0.16
COMMD4-222ENST00000568034 GON7Q9BXV9 100 aa14.07□□□□□ -0.16
COMMD4-222ENST00000568034 OR51B2Q9Y5P1 312 aa14.07□□□□□ -0.16
COMMD4-222ENST00000568034 A0A1W2PN81 502 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 DUXBA0A1W2PPF3 345 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 FBXO24O75426 580 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 DUS4LO95620 317 aaKnown RBP14.06□□□□□ -0.16
COMMD4-222ENST00000568034 PSMB8P28062 276 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 CHRNA7P36544 502 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 CD83Q01151 205 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 TMEM267Q0VDI3 215 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-222ENST00000568034 DCTN2Q13561 401 aaKnown RBP14.06□□□□□ -0.16
COMMD4-222ENST00000568034 AARDQ4LEZ3 155 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 ZNF429Q86V71 674 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 SPATA3Q8NHX4 192 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 MITD1Q8WV92 249 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 FYTTD1Q96QD9 318 aaKnown RBP14.06□□□□□ -0.16
COMMD4-222ENST00000568034 SPIN2AQ99865 258 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 SPIN2BQ9BPZ2 258 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 MARVELD1Q9BSK0 173 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 QTRT1Q9BXR0 403 aaKnown RBP14.06□□□□□ -0.16
COMMD4-222ENST00000568034 COMMD5Q9GZQ3 224 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 NDUFA4L2Q9NRX3 87 aa14.06□□□□□ -0.16
COMMD4-222ENST00000568034 IGLC7A0M8Q6 106 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 ADARB2-AS1A8MUL3 147 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 PTTG1O95997 202 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 IL5P05113 134 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 AREGP15514 252 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 FOXE3Q13461 319 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 PLET1Q6UQ28 207 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 LCNL1Q6ZST4 164 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms