RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TAS2R31P59538 309 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 CATR1Q13166 79 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 TIMM50Q3ZCQ8 353 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 SSX9Q7RTT3 188 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 SPAG16Q8N0X2 631 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 UXS1Q8NBZ7 420 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 OR13F1Q8NGS4 319 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 CD300LFQ8TDQ1 290 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 SECTM1Q8WVN6 248 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 WDR89Q96FK6 387 aaPredicted RBP11.26□□□□□ -0.61
RNF40-209ENST00000566703 RETNQ9HD89 108 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 THYN1Q9P016 225 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 CGB1A6NKQ9 187 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 HPRT1P00492 218 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 CLEC3BP05452 202 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 C8orf88P0DMB2 117 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 NQO2P16083 231 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 EDN2P20800 178 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 CBX5P45973 191 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 ELLP55199 621 aaPredicted RBP11.25□□□□□ -0.61
RNF40-209ENST00000566703 OR2B8PP59922 312 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 C19orf35Q6ZS72 473 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 TMEM61Q8N0U2 210 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 GIMAP1Q8WWP7 306 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 Q9H521 79 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 HRASLSQ9HDD0 168 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 DIABLOQ9NR28 239 aa11.25□□□□□ -0.61
RNF40-209ENST00000566703 MRPL27Q9P0M9 148 aaKnown RBP11.25□□□□□ -0.61
RNF40-209ENST00000566703 DYNC2H1Q8NCM8 4307 aaKnown RBP11.24□□□□□ -0.61
RNF40-209ENST00000566703 UPK2O00526 184 aa11.24□□□□□ -0.61
RNF40-209ENST00000566703 CYB5BO43169 146 aa11.24□□□□□ -0.61
RNF40-209ENST00000566703 IGHV3-23P01764 117 aa11.24□□□□□ -0.61
RNF40-209ENST00000566703 THOC7Q6I9Y2 204 aaKnown RBP11.24□□□□□ -0.61
RNF40-209ENST00000566703 GVQW1Q8N7I0 195 aa11.24□□□□□ -0.61
RNF40-209ENST00000566703 OR52B4Q8NGK2 314 aa11.24□□□□□ -0.61
RNF40-209ENST00000566703 BORCS5Q969J3 196 aa11.24□□□□□ -0.61
RNF40-209ENST00000566703 GPHA2Q96T91 129 aa11.24□□□□□ -0.61
RNF40-209ENST00000566703 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
RNF40-209ENST00000566703 COMMD5Q9GZQ3 224 aa11.24□□□□□ -0.61
RNF40-209ENST00000566703 SLC5A7Q9GZV3 580 aa11.24□□□□□ -0.61
RNF40-209ENST00000566703 WFDC10AQ9H1F0 79 aa11.24□□□□□ -0.61
RNF40-209ENST00000566703 PLEKHA2Q9HB19 425 aa11.24□□□□□ -0.61
RNF40-209ENST00000566703 MLXQ9UH92 298 aa11.24□□□□□ -0.61
RNF40-209ENST00000566703 IGLC7A0M8Q6 106 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 TNFSF12O43508 249 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 MYOD1P15172 320 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 PTBP1P26599 531 aaKnown RBP eCLIP11.23□□□□□ -0.61
RNF40-209ENST00000566703 ZNF773Q6PK81 442 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 HSD17B13Q7Z5P4 300 aaPredicted RBP11.23□□□□□ -0.61
RNF40-209ENST00000566703 CADM3Q8N126 398 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 OR5AP2Q8NGF4 316 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 OR5H6Q8NGV6 325 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 ZNF502Q8TBZ5 544 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 VN1R17PQ8TDU5 208 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 CACNG8Q8WXS5 425 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 SLC25A38Q96DW6 304 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 GGTLC1Q9BX51 225 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 AUNIPQ9H7T9 357 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 UFC1Q9Y3C8 167 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 S4R3C0 116 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 DNAH7Q8WXX0 4024 aa11.23□□□□□ -0.61
RNF40-209ENST00000566703 LOC102724200A0A096LPH7 203 aaPredicted RBP11.22□□□□□ -0.61
RNF40-209ENST00000566703 MFSD2BA6NFX1 497 aa11.22□□□□□ -0.61
RNF40-209ENST00000566703 SULT1C2O00338 296 aa11.22□□□□□ -0.61
RNF40-209ENST00000566703 REG1AP05451 166 aa11.22□□□□□ -0.61
RNF40-209ENST00000566703 CLEC2LP0C7M8 214 aa11.22□□□□□ -0.61
RNF40-209ENST00000566703 MXD1Q05195 221 aa11.22□□□□□ -0.61
RNF40-209ENST00000566703 TM4SF20Q53R12 229 aa11.22□□□□□ -0.61
RNF40-209ENST00000566703 IDNKQ5T6J7 187 aa11.22□□□□□ -0.61
RNF40-209ENST00000566703 PLET1Q6UQ28 207 aa11.22□□□□□ -0.61
RNF40-209ENST00000566703 ATP6V0BQ99437 205 aa11.22□□□□□ -0.61
RNF40-209ENST00000566703 RYR2Q92736 4967 aa11.22□□□□□ -0.61
RNF40-209ENST00000566703 TRAV3A0A0B4J244 114 aa11.21□□□□□ -0.61
RNF40-209ENST00000566703 PTHLHP12272 177 aa11.21□□□□□ -0.61
RNF40-209ENST00000566703 ZNF585BQ52M93 769 aa11.21□□□□□ -0.61
RNF40-209ENST00000566703 DHRS11Q6UWP2 260 aa11.21□□□□□ -0.61
RNF40-209ENST00000566703 BTNL8Q6UX41 500 aa11.21□□□□□ -0.61
RNF40-209ENST00000566703 UNQ9165/PRO28630Q6UXU0 137 aa11.21□□□□□ -0.61
RNF40-209ENST00000566703 RBPMS2Q6ZRY4 209 aaKnown RBP11.21□□□□□ -0.61
RNF40-209ENST00000566703 QTRT1Q9BXR0 403 aaKnown RBP11.21□□□□□ -0.61
RNF40-209ENST00000566703 ZNF436Q9C0F3 470 aaPredicted RBP11.21□□□□□ -0.61
RNF40-209ENST00000566703 C5orf66Q9H5L9 145 aa11.21□□□□□ -0.61
RNF40-209ENST00000566703 COMMD9Q9P000 198 aa11.21□□□□□ -0.61
RNF40-209ENST00000566703 XRCC3O43542 346 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 SCAF4O95104 1147 aaKnown RBP11.2□□□□□ -0.62
RNF40-209ENST00000566703 TRAPPC2P0DI81 140 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 TRAPPC2BP0DI82 140 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 GNRHRP30968 328 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 GPR183P32249 361 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 FXYD4P59646 89 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 ZNF818PQ6ZRF7 136 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 CROCCP3Q8IVE0 287 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 SLC38A6Q8IZM9 456 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 OR2C3Q8N628 320 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 DMBX1Q8NFW5 382 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 OR1L6Q8NGR2 347 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 OVOL2Q9BRP0 275 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 TMEM140Q9NV12 185 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 TP53TG1Q9Y2A0 90 aa11.2□□□□□ -0.62
RNF40-209ENST00000566703 SACSQ9NZJ4 4579 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms