RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 NAA60Q9H7X0 242 aa20.4■□□□□ 0.86
NME3-209ENST00000566600 SNAPC5O75971 98 aa20.39■□□□□ 0.85
NME3-209ENST00000566600 C10orf55Q5SWW7 151 aa20.39■□□□□ 0.85
NME3-209ENST00000566600 ASPHD1Q5U4P2 390 aa20.39■□□□□ 0.85
NME3-209ENST00000566600 SGPP2Q8IWX5 399 aa20.39■□□□□ 0.85
NME3-209ENST00000566600 KLHL30-AS1Q8NEE0 82 aa20.39■□□□□ 0.85
NME3-209ENST00000566600 OR5T1Q8NG75 326 aa20.39■□□□□ 0.85
NME3-209ENST00000566600 SEC22AQ96IW7 307 aa20.39■□□□□ 0.85
NME3-209ENST00000566600 UBE2E2Q96LR5 201 aa20.39■□□□□ 0.85
NME3-209ENST00000566600 C7orf50Q9BRJ6 194 aaKnown RBP20.39■□□□□ 0.85
NME3-209ENST00000566600 CCDC32Q9BV29 185 aa20.39■□□□□ 0.85
NME3-209ENST00000566600 VSIG4Q9Y279 399 aa20.39■□□□□ 0.85
NME3-209ENST00000566600 CRYM-AS1A6NIL9 109 aa20.38■□□□□ 0.85
NME3-209ENST00000566600 UCP1P25874 307 aa20.38■□□□□ 0.85
NME3-209ENST00000566600 DHODHQ02127 395 aa20.38■□□□□ 0.85
NME3-209ENST00000566600 TRIM16LQ309B1 348 aa20.38■□□□□ 0.85
NME3-209ENST00000566600 H2BFWTQ7Z2G1 175 aa20.38■□□□□ 0.85
NME3-209ENST00000566600 SLC25A42Q86VD7 318 aa20.38■□□□□ 0.85
NME3-209ENST00000566600 TMEM222Q9H0R3 208 aa20.38■□□□□ 0.85
NME3-209ENST00000566600 ZNF355PQ9NSJ1 428 aa20.38■□□□□ 0.85
NME3-209ENST00000566600 KCNIP3Q9Y2W7 256 aa20.38■□□□□ 0.85
NME3-209ENST00000566600 TRRAPQ9Y4A5 3859 aa20.37■□□□□ 0.85
NME3-209ENST00000566600 TRAV3A0A0B4J244 114 aa20.37■□□□□ 0.85
NME3-209ENST00000566600 BRI3O95415 125 aa20.37■□□□□ 0.85
NME3-209ENST00000566600 IGKV1-39P01597 117 aa20.37■□□□□ 0.85
NME3-209ENST00000566600 IGKV1D-39P04432 117 aa20.37■□□□□ 0.85
NME3-209ENST00000566600 OR9G9P0C7N8 305 aa20.37■□□□□ 0.85
NME3-209ENST00000566600 SP6Q3SY56 376 aa20.37■□□□□ 0.85
NME3-209ENST00000566600 ZNF491Q8N8L2 437 aa20.37■□□□□ 0.85
NME3-209ENST00000566600 FYTTD1Q96QD9 318 aaKnown RBP20.37■□□□□ 0.85
NME3-209ENST00000566600 FKBP11Q9NYL4 201 aa20.37■□□□□ 0.85
NME3-209ENST00000566600 PRNDQ9UKY0 176 aa20.37■□□□□ 0.85
NME3-209ENST00000566600 WNK1Q9H4A3 2382 aa20.37■□□□□ 0.85
NME3-209ENST00000566600 APELAP0DMC3 54 aa20.36■□□□□ 0.85
NME3-209ENST00000566600 C4orf3Q8WVX3 66 aa20.36■□□□□ 0.85
NME3-209ENST00000566600 COA4Q9NYJ1 87 aa20.36■□□□□ 0.85
NME3-209ENST00000566600 TEX22C9J3V5 150 aa20.35■□□□□ 0.85
NME3-209ENST00000566600 PF4P02776 101 aa20.35■□□□□ 0.85
NME3-209ENST00000566600 OR5AC1P0C628 307 aa20.35■□□□□ 0.85
NME3-209ENST00000566600 TPPP2P59282 170 aa20.35■□□□□ 0.85
NME3-209ENST00000566600 OR2B8PP59922 312 aa20.35■□□□□ 0.85
NME3-209ENST00000566600 KIAA0141Q14154 515 aaPredicted RBP20.35■□□□□ 0.85
NME3-209ENST00000566600 RBMS2Q15434 407 aaKnown RBP20.35■□□□□ 0.85
NME3-209ENST00000566600 THOC7Q6I9Y2 204 aaKnown RBP20.35■□□□□ 0.85
NME3-209ENST00000566600 TTC9CQ8N5M4 171 aa20.35■□□□□ 0.85
NME3-209ENST00000566600 ADAD2Q8NCV1 583 aaKnown RBP20.35■□□□□ 0.85
NME3-209ENST00000566600 MS4A10Q96PG2 267 aa20.35■□□□□ 0.85
NME3-209ENST00000566600 SRSF8Q9BRL6 282 aaKnown RBP20.35■□□□□ 0.85
NME3-209ENST00000566600 WDR12Q9GZL7 423 aaKnown RBP20.35■□□□□ 0.85
NME3-209ENST00000566600 MGAM2Q2M2H8 2515 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 LINC00854A0A1B0GVQ3 168 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 CDS2O95674 445 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 TRGV3P03979 118 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 AKR1C4P17516 323 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 AKR1C2P52895 323 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 C18orf65Q6ZTR6 163 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 C8orf86Q6ZUL3 223 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 OR1L8Q8NGR8 309 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 OR4A16Q8NH70 328 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 CASTOR1Q8WTX7 329 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 GLYATL2Q8WU03 294 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 GALNT14Q96FL9 552 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 QTRT1Q9BXR0 403 aaKnown RBP20.34■□□□□ 0.85
NME3-209ENST00000566600 ZNF257Q9Y2Q1 563 aa20.34■□□□□ 0.85
NME3-209ENST00000566600 ANXA3P12429 323 aa20.33■□□□□ 0.85
NME3-209ENST00000566600 ZNF846Q147U1 533 aa20.33■□□□□ 0.85
NME3-209ENST00000566600 TMED4Q7Z7H5 227 aa20.33■□□□□ 0.85
NME3-209ENST00000566600 TMEM230Q96A57 120 aa20.33■□□□□ 0.85
NME3-209ENST00000566600 RRNAD1Q96FB5 475 aaKnown RBP20.33■□□□□ 0.85
NME3-209ENST00000566600 OR51B2Q9Y5P1 312 aa20.33■□□□□ 0.85
NME3-209ENST00000566600 A0A0G2JLM5 398 aa20.32■□□□□ 0.84
NME3-209ENST00000566600 HMX3A6NHT5 357 aa20.32■□□□□ 0.84
NME3-209ENST00000566600 NPIPB5A8MRT5 1133 aa20.32■□□□□ 0.84
NME3-209ENST00000566600 E7EUB6 86 aa20.32■□□□□ 0.84
NME3-209ENST00000566600 TRAPPC2P0DI81 140 aa20.32■□□□□ 0.84
NME3-209ENST00000566600 TRAPPC2BP0DI82 140 aa20.32■□□□□ 0.84
NME3-209ENST00000566600 MYOD1P15172 320 aa20.32■□□□□ 0.84
NME3-209ENST00000566600 MYCNOSP40205 109 aa20.32■□□□□ 0.84
NME3-209ENST00000566600 RUNX1Q01196 453 aa20.32■□□□□ 0.84
NME3-209ENST00000566600 TMEM128Q5BJH2 165 aa20.32■□□□□ 0.84
NME3-209ENST00000566600 HSD17B13Q7Z5P4 300 aaPredicted RBP20.32■□□□□ 0.84
NME3-209ENST00000566600 OR5B3Q8NH48 314 aa20.32■□□□□ 0.84
NME3-209ENST00000566600 RNASE11Q8TAA1 199 aaKnown RBP20.32■□□□□ 0.84
NME3-209ENST00000566600 TMEM14BQ9NUH8 114 aa20.32■□□□□ 0.84
NME3-209ENST00000566600 NSG2Q9Y328 171 aa20.32■□□□□ 0.84
NME3-209ENST00000566600 PIGBOS1A0A0B4J2F0 54 aa20.31■□□□□ 0.84
NME3-209ENST00000566600 TEX50A0A1B0GTY4 177 aa20.31■□□□□ 0.84
NME3-209ENST00000566600 A0A1B0GW64 132 aa20.31■□□□□ 0.84
NME3-209ENST00000566600 C15orf61A6NNL5 157 aa20.31■□□□□ 0.84
NME3-209ENST00000566600 DHFRP00374 187 aa20.31■□□□□ 0.84
NME3-209ENST00000566600 IGKV1-5P01602 117 aa20.31■□□□□ 0.84
NME3-209ENST00000566600 CCR6P51684 374 aa20.31■□□□□ 0.84
NME3-209ENST00000566600 RBPMSQ93062 196 aaKnown RBP20.31■□□□□ 0.84
NME3-209ENST00000566600 TMEM56Q96MV1 263 aa20.31■□□□□ 0.84
NME3-209ENST00000566600 GNB4Q9HAV0 340 aa20.31■□□□□ 0.84
NME3-209ENST00000566600 TMEM56-RWDD3S4R434 201 aa20.31■□□□□ 0.84
NME3-209ENST00000566600 C13orf42A0A1B0GVH6 325 aa20.3■□□□□ 0.84
NME3-209ENST00000566600 NDUFB6O95139 128 aa20.3■□□□□ 0.84
NME3-209ENST00000566600 PSMB6P28072 239 aa20.3■□□□□ 0.84
NME3-209ENST00000566600 SRPXP78539 464 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms