RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 IGHMP01871 453 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 SMIM17P0DL12 118 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 C1GALT1C1LP0DN25 315 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 CYBAP13498 195 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 CDK2P24941 298 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 PHBP35232 272 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 GLRXP35754 106 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 CXCL12P48061 93 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 RHEBQ15382 184 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 NANOGP8Q6NSW7 305 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 DCUN1D2Q6PH85 259 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 TBPL2Q6SJ96 375 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 GTSCR1Q86UQ5 136 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 LRP11Q86VZ4 500 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 CYB561D1Q8N8Q1 229 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 FER1L6-AS1Q8NA97 138 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF439Q8NDP4 499 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 OR11H6Q8NGC7 330 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 OR10A6Q8NH74 314 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 LINC01560Q8TB33 94 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 LMX1AQ8TE12 382 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 GNPNAT1Q96EK6 184 aaPredicted RBP2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 L3HYPDHQ96EM0 354 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 NMNAT3Q96T66 252 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF2Q9BSG1 426 aaPredicted RBP2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 NDFIP1Q9BT67 221 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 SHANK2-AS3Q9BTD1 123 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 PBDC1Q9BVG4 233 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 COMMD5Q9GZQ3 224 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 MAP1LC3BQ9GZQ8 125 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 CCDC90BQ9GZT6 254 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 C6orf62Q9GZU0 229 aaPredicted RBP2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 GFRA4Q9GZZ7 299 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 GABARAPL1Q9H0R8 117 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 GPR84Q9NQS5 396 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 PRTFDC1Q9NRG1 225 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF355PQ9NSJ1 428 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 PRNDQ9UKY0 176 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 SSR3Q9UNL2 185 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 ANKRD12Q6UB98 2062 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 C5orf42Q9H799 3197 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 BCL9O00512 1426 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 TECPR2O15040 1411 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 TNS3Q68CZ2 1445 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 NHSQ6T4R5 1651 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 LOXHD1Q8IVV2 1947 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 GCN1Q92616 2671 aaKnown RBP2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 PHRF1Q9P1Y6 1649 aaKnown RBP2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 NUP214P35658 2090 aaPredicted RBP2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 KIF13BQ9NQT8 1826 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 N4BP2Q86UW6 1770 aaPredicted RBP2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 IGKV1-12A0A0C4DH73 117 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 IGHV1-69-2A0A0G2JMI3 117 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 A0A1W2PQ67 120 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 LINC00862A6NCI5 91 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 IZUMO1RA6ND01 250 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 CLDN25C9JDP6 229 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 PIRO00625 290 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 COX7A2LO14548 114 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 ARPC5O15511 151 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 RBFOX2O43251 390 aaKnown RBP eCLIP2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 APOMO95445 188 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 IGKV1D-12P01611 117 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 GYPCP04921 128 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 OR5AC1P0C628 307 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 IFI30P13284 250 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 IL1RNP18510 177 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 ELK1P19419 428 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 OPRK1P41145 380 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 NCALDP61601 193 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 FLI1Q01543 452 aaPredicted RBP2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 WDR86Q86TI4 376 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 SGPP2Q8IWX5 399 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF101Q8IZC7 436 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 GDPD1Q8N9F7 314 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 ST6GALNAC3Q8NDV1 305 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 OR11G2Q8NGC1 345 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 BORCS5Q969J3 196 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 SLC25A46Q96AG3 418 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 ROPN1LQ96C74 230 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 MS4A6EQ96DS6 147 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 PEBP4Q96S96 227 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 CCL13Q99616 98 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 TMEM222Q9H0R3 208 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF286AQ9HBT8 521 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 TBX21Q9UL17 535 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 HSPB11Q9Y547 144 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 OR51B4Q9Y5P0 310 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 ITSN1Q15811 1721 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 CFAP54Q96N23 3096 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 BAZ2AQ9UIF9 1905 aaKnown RBP2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 ALS2Q96Q42 1657 aa2.24□□□□□ -2.05
HERPUD1-211ENST00000566550 NCOR1O75376 2440 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 ANKRD17O75179 2603 aaKnown RBP2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 A0A096LNJ9 63 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF729A6NN14 1252 aaPredicted RBP2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 H7C1C5 153 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF861PO60384 105 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 NDUFC2O95298 119 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms