RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ZNF841Q6ZN19 808 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 ATG4DQ86TL0 474 aaPredicted RBP2.48□□□□□ -2.01
CHD9-218ENST00000566029 KLHDC7BQ96G42 594 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 RETNQ9HD89 108 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 NRN1Q9NPD7 142 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 PILRBQ9UKJ0 227 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 MDC1Q14676 2089 aaKnown RBP2.48□□□□□ -2.01
CHD9-218ENST00000566029 MAP1BP46821 2468 aaKnown RBP2.48□□□□□ -2.01
CHD9-218ENST00000566029 TMPRSS2O15393 492 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 CRIP3Q6Q6R5 217 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 CXorf67Q86X51 503 aaPredicted RBP2.48□□□□□ -2.01
CHD9-218ENST00000566029 OR5AU1Q8NGC0 362 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 OR10J6PQ8NGY7 276 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 BORCS8Q96FH0 119 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 SIGLEC12Q96PQ1 595 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 DPM3Q9P2X0 92 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 TRBV7-9A0A0J9YWB2 115 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 B5MCH6 92 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 HYPMO75409 117 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 BRK1Q8WUW1 75 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 ST8SIA1Q92185 356 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 UFC1Q9Y3C8 167 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 TRAV9-2A0A087WT02 112 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 NAPSAO96009 420 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 SMIM13P0DJ93 91 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 CT45A10P0DMU9 189 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 DPTQ07507 201 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 MPV17LQ2QL34 196 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 SLC18B1Q6NT16 456 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 MRPL55Q7Z7F7 128 aaKnown RBP2.48□□□□□ -2.01
CHD9-218ENST00000566029 OR2T6Q8NHC8 308 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 VN1R1Q9GZP7 353 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 FAM60AQ9NP50 221 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 MMP25Q9NPA2 562 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 R4GMQ9 66 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 TRAV2A0A0B4J234 112 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 H3BUT2 72 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 BLVRBP30043 206 aaPredicted RBP2.48□□□□□ -2.01
CHD9-218ENST00000566029 PSMB3P49720 205 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 PAX2Q02962 417 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 CBLN3Q6UW01 205 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 CEND1Q8N111 149 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 SPEM1Q8N4L4 309 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 DEFB125Q8N687 156 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 GNB4Q9HAV0 340 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 LYRM4Q9HD34 91 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 RPRMQ9NS64 109 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 DYSFO75923 2080 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 MYO7BQ6PIF6 2116 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 TRAV5A0A0B4J249 113 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.48□□□□□ -2.01
CHD9-218ENST00000566029 CD5LO43866 347 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 ZNF253O75346 499 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 VGLL4Q14135 290 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 RTP5Q14D33 572 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 SPATA31B1PQ5VZV4 182 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 CRIPAKQ8N1N5 446 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 UNC13CQ8NB66 2214 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 PP6455Q8WZ26 134 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 GALMQ96C23 342 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 OR10A2Q9H208 303 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 TMEM74BQ9NUR3 256 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 TBL2Q9Y4P3 447 aaKnown RBP2.48□□□□□ -2.01
CHD9-218ENST00000566029 HEATR5BQ9P2D3 2071 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 AZU1P20160 251 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 PSG9Q00887 426 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 TMEM155Q4W5P6 130 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 DUX4L9Q6RFH8 374 aaPredicted RBP2.48□□□□□ -2.01
CHD9-218ENST00000566029 OR10P1Q8NGE3 313 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 MRAP2Q96G30 205 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 PRDM14Q9GZV8 571 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 LIME1Q9H400 295 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.48□□□□□ -2.01
CHD9-218ENST00000566029 TRGV11A0A075B6L2 103 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 GPX1P07203 203 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 CT62P0C5K7 136 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 SMIM10L1P0DMW3 83 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 SLC25A6P12236 298 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 SSR4P51571 173 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 CXorf66Q5JRM2 361 aaPredicted RBP2.48□□□□□ -2.01
CHD9-218ENST00000566029 CDCP2Q5VXM1 449 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 OR9G1Q8NH87 305 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 MRPL30Q8TCC3 161 aaKnown RBP2.48□□□□□ -2.01
CHD9-218ENST00000566029 SMIM10Q96HG1 83 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 FOXQ1Q9C009 403 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 PBOV1Q9GZY1 135 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 RAB1BQ9H0U4 201 aa2.48□□□□□ -2.01
CHD9-218ENST00000566029 THAP10Q9P2Z0 257 aaPredicted RBP2.48□□□□□ -2.01
CHD9-218ENST00000566029 IGKV1-8A0A0C4DH67 115 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 F2Z2F3 143 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 DXOO77932 396 aaKnown RBP2.47□□□□□ -2.01
CHD9-218ENST00000566029 C5orf47Q569G3 176 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 Q6ZSR3 168 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 LINC00346Q8IVM7 164 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 OR10AG1Q8NH19 301 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 FGF14Q92915 247 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 ZNF501Q96CX3 271 aaPredicted RBP2.47□□□□□ -2.01
CHD9-218ENST00000566029 TMEM222Q9H0R3 208 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 S1PR5Q9H228 398 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 PLEKHF2Q9H8W4 249 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms