RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 C4orf3Q8WVX3 66 aa16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 SEC22AQ96IW7 307 aa16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 CMYA5Q8N3K9 4069 aa16.41■□□□□ 0.22
SHCBP1-205ENST00000566016 IGKV1-39P01597 117 aa16.41■□□□□ 0.22
SHCBP1-205ENST00000566016 IGKV1D-39P04432 117 aa16.41■□□□□ 0.22
SHCBP1-205ENST00000566016 UCP1P25874 307 aa16.41■□□□□ 0.22
SHCBP1-205ENST00000566016 G6PCP35575 357 aa16.41■□□□□ 0.22
SHCBP1-205ENST00000566016 INPP1P49441 399 aa16.41■□□□□ 0.22
SHCBP1-205ENST00000566016 ZNF491Q8N8L2 437 aa16.41■□□□□ 0.22
SHCBP1-205ENST00000566016 FAM110DQ8TAY7 271 aaPredicted RBP16.41■□□□□ 0.22
SHCBP1-205ENST00000566016 TSC22D3Q99576 134 aa16.41■□□□□ 0.22
SHCBP1-205ENST00000566016 SLC25A21Q9BQT8 299 aaPredicted RBP16.41■□□□□ 0.22
SHCBP1-205ENST00000566016 NAP1L6A6NFF2 107 aa16.4■□□□□ 0.22
SHCBP1-205ENST00000566016 CRYM-AS1A6NIL9 109 aa16.4■□□□□ 0.22
SHCBP1-205ENST00000566016 NUDT19A8MXV4 375 aa16.4■□□□□ 0.22
SHCBP1-205ENST00000566016 TEX22C9J3V5 150 aa16.4■□□□□ 0.22
SHCBP1-205ENST00000566016 IL7P13232 177 aa16.4■□□□□ 0.22
SHCBP1-205ENST00000566016 S100ZQ8WXG8 99 aa16.4■□□□□ 0.22
SHCBP1-205ENST00000566016 NAA60Q9H7X0 242 aa16.4■□□□□ 0.22
SHCBP1-205ENST00000566016 VSIG4Q9Y279 399 aa16.4■□□□□ 0.22
SHCBP1-205ENST00000566016 TRAV3A0A0B4J244 114 aa16.39■□□□□ 0.21
SHCBP1-205ENST00000566016 ATG12O94817 140 aa16.39■□□□□ 0.21
SHCBP1-205ENST00000566016 OR9G9P0C7N8 305 aa16.39■□□□□ 0.21
SHCBP1-205ENST00000566016 RUNX1Q01196 453 aa16.39■□□□□ 0.21
SHCBP1-205ENST00000566016 THOC7Q6I9Y2 204 aaKnown RBP16.39■□□□□ 0.21
SHCBP1-205ENST00000566016 C8orf86Q6ZUL3 223 aa16.39■□□□□ 0.21
SHCBP1-205ENST00000566016 SLC25A42Q86VD7 318 aa16.39■□□□□ 0.21
SHCBP1-205ENST00000566016 ADAD2Q8NCV1 583 aaKnown RBP16.39■□□□□ 0.21
SHCBP1-205ENST00000566016 C7orf50Q9BRJ6 194 aaKnown RBP16.39■□□□□ 0.21
SHCBP1-205ENST00000566016 SRSF8Q9BRL6 282 aaKnown RBP16.39■□□□□ 0.21
SHCBP1-205ENST00000566016 CCDC32Q9BV29 185 aa16.39■□□□□ 0.21
SHCBP1-205ENST00000566016 COMMD5Q9GZQ3 224 aa16.39■□□□□ 0.21
SHCBP1-205ENST00000566016 TMEM222Q9H0R3 208 aa16.39■□□□□ 0.21
SHCBP1-205ENST00000566016 TEX13DA0A0J9YY54 714 aaPredicted RBP16.38■□□□□ 0.21
SHCBP1-205ENST00000566016 A0A1B0GW64 132 aa16.38■□□□□ 0.21
SHCBP1-205ENST00000566016 OR2B8PP59922 312 aa16.38■□□□□ 0.21
SHCBP1-205ENST00000566016 C18orf65Q6ZTR6 163 aa16.38■□□□□ 0.21
SHCBP1-205ENST00000566016 TTC9CQ8N5M4 171 aa16.38■□□□□ 0.21
SHCBP1-205ENST00000566016 GALNT14Q96FL9 552 aa16.38■□□□□ 0.21
SHCBP1-205ENST00000566016 PRNDQ9UKY0 176 aa16.38■□□□□ 0.21
SHCBP1-205ENST00000566016 NPIPB5A8MRT5 1133 aa16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 E7EUB6 86 aa16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 SNAPC5O75971 98 aa16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 PF4P02776 101 aa16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 OR5AC1P0C628 307 aa16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 RBMS2Q15434 407 aaKnown RBP16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 ETV3LQ6ZN32 361 aa16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 SGPP2Q8IWX5 399 aa16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 OR5T1Q8NG75 326 aa16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 GLYATL2Q8WU03 294 aa16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 TMEM230Q96A57 120 aa16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 QTRT1Q9BXR0 403 aaKnown RBP16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 TMEM14BQ9NUH8 114 aa16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 FKBP11Q9NYL4 201 aa16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 ZNF257Q9Y2Q1 563 aa16.37■□□□□ 0.21
SHCBP1-205ENST00000566016 CGB1A6NKQ9 187 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 C15orf61A6NNL5 157 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 I3L521 148 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 CDS2O95674 445 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 TRGV3P03979 118 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 P0C879 139 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 APELAP0DMC3 54 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 TPPP2P59282 170 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 DHODHQ02127 395 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 TRIM16LQ309B1 348 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 SP6Q3SY56 376 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 H2BFWTQ7Z2G1 175 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 OR5B3Q8NH48 314 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 CASTOR1Q8WTX7 329 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 P2RX4Q99571 388 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 COA4Q9NYJ1 87 aa16.36■□□□□ 0.21
SHCBP1-205ENST00000566016 CENPXA8MT69 81 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 MYCNOSP40205 109 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 HSD17B13Q7Z5P4 300 aaPredicted RBP16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 OR1L8Q8NGR8 309 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 FYTTD1Q96QD9 318 aaKnown RBP16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 GNB4Q9HAV0 340 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 ZNF355PQ9NSJ1 428 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 KCNIP3Q9Y2W7 256 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 A0A0G2JLM5 398 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 HMX3A6NHT5 357 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 IGKV1-5P01602 117 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 CRYGCP07315 174 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 MYOD1P15172 320 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 AKR1C2P52895 323 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 FHL3Q13643 280 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 WFDC9Q8NEX5 89 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 RBPMSQ93062 196 aaKnown RBP16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 RAX2Q96IS3 184 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 MS4A10Q96PG2 267 aa16.35■□□□□ 0.21
SHCBP1-205ENST00000566016 TRBV9A0A0B4J1U6 114 aa16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 IGLC7A0M8Q6 106 aa16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 CCL24O00175 119 aa16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 LGALS1P09382 135 aaKnown RBP16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 SUPT4H1P63272 117 aaKnown RBP16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 KLK9Q2XQG4 91 aa16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 TMEM128Q5BJH2 165 aa16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 FAM219AQ8IW50 185 aa16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 IL22RA2Q969J5 263 aa16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 USMG5Q96IX5 58 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms