RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 DEFB125Q8N687 156 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 UXS1Q8NBZ7 420 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 DMBX1Q8NFW5 382 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 OR6F1Q8NGZ6 308 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 OR51H1Q8NH63 302 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 OR4A5Q8NH83 315 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 CD300LFQ8TDQ1 290 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 BORCS5Q969J3 196 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 ISOC1Q96CN7 298 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 SLC25A38Q96DW6 304 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 HINT2Q9BX68 163 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 TECRQ9NZ01 308 aaKnown RBP4.86□□□□□ -1.63
TCF4-228ENST00000565393 THYN1Q9P016 225 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 TRAV3A0A0B4J244 114 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 TEX50A0A1B0GTY4 177 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 LGALS9O00182 355 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 TMEM127O75204 238 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 PGLYRP1O75594 196 aaPredicted RBP4.85□□□□□ -1.63
TCF4-228ENST00000565393 SNAPC5O75971 98 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 KRASP01116 189 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 CRYGCP07315 174 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 TRAPPC2P0DI81 140 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 TRAPPC2BP0DI82 140 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 OR13C7P0DN81 318 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 CTRB1P17538 263 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 EDN2P20800 178 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 GNRHRP30968 328 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 PRSS3P35030 304 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 TGFBR1P36897 503 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 LPAR6P43657 344 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 TAS2R31P59538 309 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 OR2B8PP59922 312 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 ERVK-16P61578 105 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 TSPAN5P62079 268 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 MSMO1Q15800 293 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 KCTD21Q4G0X4 260 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 ZNF585BQ52M93 769 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 TMEM69Q5SWH9 247 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 ZNF57Q68EA5 555 aaPredicted RBP4.85□□□□□ -1.63
TCF4-228ENST00000565393 CTRB2Q6GPI1 263 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 PLET1Q6UQ28 207 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 DHRS11Q6UWP2 260 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 ZNF818PQ6ZRF7 136 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 RBPMS2Q6ZRY4 209 aaKnown RBP4.85□□□□□ -1.63
TCF4-228ENST00000565393 SLC16A13Q7RTY0 426 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 CMTM1Q8IZ96 169 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 SAMD12Q8N8I0 201 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 OR10W1Q8NGF6 305 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 OR52B4Q8NGK2 314 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 OR5H2Q8NGV7 314 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 WDR89Q96FK6 387 aaPredicted RBP4.85□□□□□ -1.63
TCF4-228ENST00000565393 CXorf58Q96LI9 332 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 FANCD2OSQ96PS1 177 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 ZNF2Q9BSG1 426 aaPredicted RBP4.85□□□□□ -1.63
TCF4-228ENST00000565393 PLEKHA2Q9HB19 425 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 VCX3AQ9NNX9 186 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 GAR1Q9NY12 217 aaKnown RBP4.85□□□□□ -1.63
TCF4-228ENST00000565393 BET1LQ9NYM9 111 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 EHFQ9NZC4 300 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 DMRT1Q9Y5R6 373 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 CEPT1Q9Y6K0 416 aa4.85□□□□□ -1.63
TCF4-228ENST00000565393 A0A087WXM4 84 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 IGHV3-35A0A0C4DH35 117 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 A0A1B0GW64 132 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 CGB1A6NKQ9 187 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 RBFOX2O43251 390 aaKnown RBP eCLIP4.84□□□□□ -1.63
TCF4-228ENST00000565393 SCAF4O95104 1147 aaKnown RBP4.84□□□□□ -1.63
TCF4-228ENST00000565393 S1PR2O95136 353 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 RLN1P04808 185 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 PTBP1P26599 531 aaKnown RBP eCLIP4.84□□□□□ -1.63
TCF4-228ENST00000565393 HLA-DMAP28067 261 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 S100GP29377 79 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 GPR183P32249 361 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 TAS2R20P59543 309 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 ANKRD55Q3KP44 614 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 TM4SF20Q53R12 229 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 UBE2NLQ5JXB2 153 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 LPCAT3Q6P1A2 487 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 LYSMD2Q8IV50 215 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 LAX1Q8IWV1 398 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 IL17DQ8TAD2 202 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 CACNG8Q8WXS5 425 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 DGCR14Q96DF8 476 aaKnown RBP4.84□□□□□ -1.63
TCF4-228ENST00000565393 CCDC140Q96MF4 163 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 THAP7Q9BT49 309 aaPredicted RBP4.84□□□□□ -1.63
TCF4-228ENST00000565393 QTRT1Q9BXR0 403 aaKnown RBP4.84□□□□□ -1.63
TCF4-228ENST00000565393 SRD5A3Q9H8P0 318 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 RETNQ9HD89 108 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 TMEM140Q9NV12 185 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 COMMD3Q9UBI1 195 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 NSG2Q9Y328 171 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 UFC1Q9Y3C8 167 aa4.84□□□□□ -1.63
TCF4-228ENST00000565393 IGLV11-55A0A075B6I3 123 aa4.83□□□□□ -1.64
TCF4-228ENST00000565393 IGHV3-21A0A0B4J1V1 117 aa4.83□□□□□ -1.64
TCF4-228ENST00000565393 RBMY1BA6NDE4 496 aaKnown RBP4.83□□□□□ -1.64
TCF4-228ENST00000565393 RBMY1EA6NEQ0 496 aaKnown RBP4.83□□□□□ -1.64
TCF4-228ENST00000565393 MFSD2BA6NFX1 497 aa4.83□□□□□ -1.64
TCF4-228ENST00000565393 GPR31O00270 319 aa4.83□□□□□ -1.64
TCF4-228ENST00000565393 SERPINE2P07093 398 aa4.83□□□□□ -1.64
TCF4-228ENST00000565393 RBMY1DP0C7P1 496 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms