RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 MS4A10Q96PG2 267 aa12.5□□□□□ -0.41
RAB40C-208ENST00000564703 C7orf50Q9BRJ6 194 aaKnown RBP12.5□□□□□ -0.41
RAB40C-208ENST00000564703 CCDC32Q9BV29 185 aa12.5□□□□□ -0.41
RAB40C-208ENST00000564703 WDR12Q9GZL7 423 aaKnown RBP12.5□□□□□ -0.41
RAB40C-208ENST00000564703 SLA2Q9H6Q3 261 aa12.5□□□□□ -0.41
RAB40C-208ENST00000564703 NAA60Q9H7X0 242 aa12.5□□□□□ -0.41
RAB40C-208ENST00000564703 RBMXL2O75526 392 aaKnown RBP12.49□□□□□ -0.41
RAB40C-208ENST00000564703 FGF2P09038 288 aa12.49□□□□□ -0.41
RAB40C-208ENST00000564703 APELAP0DMC3 54 aa12.49□□□□□ -0.41
RAB40C-208ENST00000564703 ANXA3P12429 323 aa12.49□□□□□ -0.41
RAB40C-208ENST00000564703 SSBP2P81877 361 aaPredicted RBP12.49□□□□□ -0.41
RAB40C-208ENST00000564703 LCNL1Q6ZST4 164 aa12.49□□□□□ -0.41
RAB40C-208ENST00000564703 TMED4Q7Z7H5 227 aa12.49□□□□□ -0.41
RAB40C-208ENST00000564703 RNF152Q8N8N0 203 aa12.49□□□□□ -0.41
RAB40C-208ENST00000564703 OR4A16Q8NH70 328 aa12.49□□□□□ -0.41
RAB40C-208ENST00000564703 RRNAD1Q96FB5 475 aaKnown RBP12.49□□□□□ -0.41
RAB40C-208ENST00000564703 KLK15Q9H2R5 256 aa12.49□□□□□ -0.41
RAB40C-208ENST00000564703 COA4Q9NYJ1 87 aa12.49□□□□□ -0.41
RAB40C-208ENST00000564703 PRNDQ9UKY0 176 aa12.49□□□□□ -0.41
RAB40C-208ENST00000564703 VSIG4Q9Y279 399 aa12.49□□□□□ -0.41
RAB40C-208ENST00000564703 TRAV3A0A0B4J244 114 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 CRYM-AS1A6NIL9 109 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 H3BUA1 57 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 TSPAN15O95858 294 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 PF4P02776 101 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 TRGV3P03979 118 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 IL6RP08887 468 aaPredicted RBP12.48□□□□□ -0.41
RAB40C-208ENST00000564703 OR5AC1P0C628 307 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 OR9G9P0C7N8 305 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 UCP1P25874 307 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 AKR1C2P52895 323 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 RBMS2Q15434 407 aaKnown RBP12.48□□□□□ -0.41
RAB40C-208ENST00000564703 C19orf54Q5BKX5 351 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 C10orf55Q5SWW7 151 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 ADAD2Q8NCV1 583 aaKnown RBP12.48□□□□□ -0.41
RAB40C-208ENST00000564703 OR1L8Q8NGR8 309 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 SEC22AQ96IW7 307 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 UBE2E2Q96LR5 201 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 TMEM222Q9H0R3 208 aa12.48□□□□□ -0.41
RAB40C-208ENST00000564703 PIGBOS1A0A0B4J2F0 54 aa12.47□□□□□ -0.41
RAB40C-208ENST00000564703 A0A0G2JLM5 398 aa12.47□□□□□ -0.41
RAB40C-208ENST00000564703 ADARB2-AS1A8MUL3 147 aa12.47□□□□□ -0.41
RAB40C-208ENST00000564703 SOX15O60248 233 aa12.47□□□□□ -0.41
RAB40C-208ENST00000564703 DHFRP00374 187 aa12.47□□□□□ -0.41
RAB40C-208ENST00000564703 TPPP2P59282 170 aa12.47□□□□□ -0.41
RAB40C-208ENST00000564703 TMEM128Q5BJH2 165 aa12.47□□□□□ -0.41
RAB40C-208ENST00000564703 TTC9CQ8N5M4 171 aa12.47□□□□□ -0.41
RAB40C-208ENST00000564703 ZNF491Q8N8L2 437 aa12.47□□□□□ -0.41
RAB40C-208ENST00000564703 HINT2Q9BX68 163 aa12.47□□□□□ -0.41
RAB40C-208ENST00000564703 NSG2Q9Y328 171 aa12.47□□□□□ -0.41
RAB40C-208ENST00000564703 OR51B2Q9Y5P1 312 aa12.47□□□□□ -0.41
RAB40C-208ENST00000564703 TEX50A0A1B0GTY4 177 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 C13orf42A0A1B0GVH6 325 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 HMX3A6NHT5 357 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 CDS2O95674 445 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 IGKV1-39P01597 117 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 IGKV1D-39P04432 117 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 TRAPPC2P0DI81 140 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 TRAPPC2BP0DI82 140 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 CCR6P51684 374 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 OR2B8PP59922 312 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 THOC7Q6I9Y2 204 aaKnown RBP12.46□□□□□ -0.41
RAB40C-208ENST00000564703 MRPL41Q8IXM3 137 aaKnown RBP12.46□□□□□ -0.41
RAB40C-208ENST00000564703 CENPSQ8N2Z9 138 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 CASTOR1Q8WTX7 329 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 GLYATL2Q8WU03 294 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 RBPMSQ93062 196 aaKnown RBP12.46□□□□□ -0.41
RAB40C-208ENST00000564703 TMEM56Q96MV1 263 aa12.46□□□□□ -0.41
RAB40C-208ENST00000564703 QTRT1Q9BXR0 403 aaKnown RBP12.46□□□□□ -0.41
RAB40C-208ENST00000564703 CYB5BO43169 146 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 LYRM1O43325 122 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 DEFA4P12838 97 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 MYOD1P15172 320 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 VAMP1P23763 118 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 MYCNOSP40205 109 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 RAB25P57735 213 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 SRPXP78539 464 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 ASPHD1Q5U4P2 390 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 C8orf86Q6ZUL3 223 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 HSD17B13Q7Z5P4 300 aaPredicted RBP12.45□□□□□ -0.42
RAB40C-208ENST00000564703 FAM219AQ8IW50 185 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 OR5B3Q8NH48 314 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 C4orf3Q8WVX3 66 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 GALNT14Q96FL9 552 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 SRSF8Q9BRL6 282 aaKnown RBP12.45□□□□□ -0.42
RAB40C-208ENST00000564703 PDCD10Q9BUL8 212 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 ZNF257Q9Y2Q1 563 aa12.45□□□□□ -0.42
RAB40C-208ENST00000564703 WNK1Q9H4A3 2382 aa12.44□□□□□ -0.42
RAB40C-208ENST00000564703 E7EUB6 86 aa12.44□□□□□ -0.42
RAB40C-208ENST00000564703 NDUFB6O95139 128 aa12.44□□□□□ -0.42
RAB40C-208ENST00000564703 BRI3O95415 125 aa12.44□□□□□ -0.42
RAB40C-208ENST00000564703 MECP2P51608 486 aaKnown RBP12.44□□□□□ -0.42
RAB40C-208ENST00000564703 TMEM268Q5VZI3 342 aa12.44□□□□□ -0.42
RAB40C-208ENST00000564703 MZT2BQ6NZ67 158 aa12.44□□□□□ -0.42
RAB40C-208ENST00000564703 SELENOHQ8IZQ5 122 aaKnown RBP12.44□□□□□ -0.42
RAB40C-208ENST00000564703 LGI3Q8N145 548 aa12.44□□□□□ -0.42
RAB40C-208ENST00000564703 MYOZ3Q8TDC0 251 aa12.44□□□□□ -0.42
RAB40C-208ENST00000564703 DPF1Q92782 380 aa12.44□□□□□ -0.42
RAB40C-208ENST00000564703 TMEM230Q96A57 120 aa12.44□□□□□ -0.42
RAB40C-208ENST00000564703 USMG5Q96IX5 58 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms