RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 OR52B2Q96RD2 323 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 PAIP2Q9BPZ3 127 aaKnown RBP0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 DCSTAMPQ9H295 470 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 TUBA4BQ9H853 241 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 PRO2289Q9P1D8 64 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 GRIN2BQ13224 1484 aa0.84□□□□□ -2.28
HMGB1P33-201ENST00000563485 NEO1Q92859 1461 aa0.84□□□□□ -2.28
HMGB1P33-201ENST00000563485 MTUS2Q5JR59 1369 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 ZFYVE9O95405 1425 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 A0A0J9YW62 118 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 A0A0J9YX75 114 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 TMEM269A0A1B0GVZ9 245 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 C2orf74A8MZ97 194 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 UBE2L6O14933 153 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 ATP5HO75947 161 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 LYPLA2O95372 231 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 SOD1P00441 154 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 HLA-DRB1P01911 266 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 CTSGP08311 255 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 CST2P09228 141 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 CCL5P13501 91 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 CPMP14384 443 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 KCNE1P15382 129 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 S100A5P33763 92 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 G6PCP35575 357 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 CD200P41217 278 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 SERPINB10P48595 397 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 CDK9P50750 372 aaKnown RBP0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 AP1S1P61966 158 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 HIST1H4AP62805 103 aaKnown RBP0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 GNA12Q03113 381 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 TMED2Q15363 201 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 SPA17Q15506 151 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 GUK1Q16774 197 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 ZNF181Q2M3W8 571 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 IBA57Q5T440 356 aaKnown RBP0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 C9orf64Q5T6V5 341 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 LPCAT3Q6P1A2 487 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 LYZL1Q6UWQ5 148 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 Q6ZS49 121 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 SSX8Q7RTT4 187 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 ZNF283Q8N7M2 679 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR13C8Q8NGS7 320 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 MRPL30Q8TCC3 161 aaKnown RBP0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 RPS4Y2Q8TD47 263 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 LMX1AQ8TE12 382 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 C12orf43Q96C57 262 aaKnown RBP0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 NIPSNAP1Q9BPW8 284 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 MIEN1Q9BRT3 115 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 PECRQ9BY49 303 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 TRIM4Q9C037 500 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 PARVBQ9HBI1 364 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 PRTFDC1Q9NRG1 225 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 GLTPQ9NZD2 209 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 ARL5AQ9Y689 179 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 ARHGAP32A7KAX9 2087 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 SCN9AQ15858 1988 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 RTTNQ86VV8 2226 aa0.83□□□□□ -2.28
HMGB1P33-201ENST00000563485 MDC1Q14676 2089 aaKnown RBP0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 PIK3C2GO75747 1445 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 WRNQ14191 1432 aaPredicted RBP eCLIP0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 MALRD1Q5VYJ5 2156 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 IGHV3-64A0A075B6Q5 118 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 TGIF2-C20orf24A0A0A6YYL0 155 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 IRGMA1A4Y4 181 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 FAAHO00519 579 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR7C1O76099 320 aaPredicted RBP0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 S1PR2O95136 353 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 TNNC2P02585 160 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 SMIM10L2AP0DMW4 78 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 SMIM10L2BP0DMW5 78 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 CYBAP13498 195 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 GZMHP20718 246 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 RPL5P46777 297 aaKnown RBP0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 ZNF90Q03938 601 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 SS18Q15532 418 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 TEX36Q5VZQ5 186 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 LHFPL1Q86WI0 220 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 OOSP2Q86WS3 158 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR8B12Q8NGG6 310 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 COMMD5Q9GZQ3 224 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 FAM96AQ9H5X1 160 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 NDUFB11Q9NX14 153 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 IDI2-AS1Q9NZ38 188 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 DOK5Q9P104 306 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 ARL2BPQ9Y2Y0 163 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 TMEM56-RWDD3S4R434 201 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 DOCK3Q8IZD9 2030 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 SIPA1L1O43166 1804 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 RTL1A6NKG5 1358 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 CACNA1SQ13698 1873 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 CAMSAP1Q5T5Y3 1602 aa0.82□□□□□ -2.28
HMGB1P33-201ENST00000563485 COL4A2P08572 1712 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 SLX4Q8IY92 1834 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 TRBV20OR9-2A0A075B6H5 130 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 TRAV26-2A0A0B4J265 109 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 A0A0J9YY10 115 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 A0A1B0GX78 115 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 hADV38S2A0JD32 116 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms