RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 C9orf62Q8N4C0 152 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 OR52E5Q8NH55 327 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 ZDHHC16Q969W1 377 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 ZNF430Q9H8G1 570 aaPredicted RBP8.12□□□□□ -1.11
SMG1-208ENST00000563448 PLSCR3Q9NRY6 295 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 METTL1Q9UBP6 276 aaKnown RBP8.12□□□□□ -1.11
SMG1-208ENST00000563448 PRNDQ9UKY0 176 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 TEX50A0A1B0GTY4 177 aa8.11□□□□□ -1.11
SMG1-208ENST00000563448 E5RGE8 158 aa8.11□□□□□ -1.11
SMG1-208ENST00000563448 WRBO00258 174 aa8.11□□□□□ -1.11
SMG1-208ENST00000563448 TMEM50AO95807 157 aa8.11□□□□□ -1.11
SMG1-208ENST00000563448 IAPPP10997 89 aa8.11□□□□□ -1.11
SMG1-208ENST00000563448 HSPE1P61604 102 aaKnown RBP8.11□□□□□ -1.11
SMG1-208ENST00000563448 RPL8P62917 257 aaKnown RBP8.11□□□□□ -1.11
SMG1-208ENST00000563448 LRRC75BQ2VPJ9 315 aa8.11□□□□□ -1.11
SMG1-208ENST00000563448 DEFB112Q30KQ8 113 aa8.11□□□□□ -1.11
SMG1-208ENST00000563448 PDLIM3Q53GG5 364 aaPredicted RBP8.11□□□□□ -1.11
SMG1-208ENST00000563448 C22orf15Q8WYQ4 148 aa8.11□□□□□ -1.11
SMG1-208ENST00000563448 SSX3Q99909 188 aa8.11□□□□□ -1.11
SMG1-208ENST00000563448 TCF19Q9Y242 345 aa8.11□□□□□ -1.11
SMG1-208ENST00000563448 OR51B2Q9Y5P1 312 aa8.11□□□□□ -1.11
SMG1-208ENST00000563448 RNF222A6NCQ9 220 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 CGB1A6NKQ9 187 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 E7EUB6 86 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 FCN1O00602 326 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 OR2F2O95006 317 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 IFNA17P01571 189 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 OPN1MWP04001 364 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 OPN1MW2P0DN77 364 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 OPN1MW3P0DN78 364 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 SPCS3P61009 180 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 PRSS8Q16651 343 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 IL17RELQ6ZVW7 336 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 PPP1R27Q86WC6 154 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 CLCC1Q96S66 551 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 YAE1D1Q9NRH1 226 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 FKBP11Q9NYL4 201 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 ZNF257Q9Y2Q1 563 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 ACANP16112 2415 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 FAM24AA6NFZ4 105 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 MSGN1A6NI15 193 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 H3BUX3 64 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 L7N2F9 121 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 MED6O75586 246 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 HKR1P10072 659 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 PVALBP20472 110 aaPredicted RBP8.1□□□□□ -1.11
SMG1-208ENST00000563448 P2RY1P47900 373 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 VAMP2P63027 116 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 MMD2Q8IY49 270 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 Q8N9W7 124 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 DTD1Q8TEA8 209 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 SMIM8Q96KF7 97 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 RAB40CQ96S21 281 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 SMR3AQ99954 134 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 MFFQ9GZY8 342 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 KIAA1456Q9P272 454 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 BOLA1Q9Y3E2 137 aa8.1□□□□□ -1.11
SMG1-208ENST00000563448 NAV3Q8IVL0 2385 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 CEBPZOSA8MTT3 80 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 FGF2P09038 288 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 VDAC2P45880 294 aaPredicted RBP8.09□□□□□ -1.11
SMG1-208ENST00000563448 AP2S1P53680 142 aaPredicted RBP8.09□□□□□ -1.11
SMG1-208ENST00000563448 SSBP2P81877 361 aaPredicted RBP8.09□□□□□ -1.11
SMG1-208ENST00000563448 PRCDQ00LT1 54 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 PLGLAQ15195 96 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 TNXAQ16473 311 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 AANATQ16613 207 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 C5orf64Q2M2E5 130 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 C10orf55Q5SWW7 151 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 ACOT7LQ6ZUV0 252 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 SLC7A5P1Q8MH63 180 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 ZNF48Q96MX3 618 aaPredicted RBP8.09□□□□□ -1.11
SMG1-208ENST00000563448 COMMD5Q9GZQ3 224 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 NDUFA4L2Q9NRX3 87 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 LYRM2Q9NU23 88 aaPredicted RBP8.09□□□□□ -1.11
SMG1-208ENST00000563448 PSENENQ9NZ42 101 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 HSPB11Q9Y547 144 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 WSB1Q9Y6I7 421 aa8.09□□□□□ -1.11
SMG1-208ENST00000563448 A0A1B0GW64 132 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 IGSF23A1L1A6 192 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 ANKRD34BA5PLL1 514 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 NCBP2LA6PVI3 153 aaKnown RBP8.08□□□□□ -1.12
SMG1-208ENST00000563448 H3BP45 60 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 CA2P00918 260 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 RPL12P30050 165 aaKnown RBP8.08□□□□□ -1.12
SMG1-208ENST00000563448 MAS1LP35410 378 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 RPL23AP62750 156 aaKnown RBP8.08□□□□□ -1.12
SMG1-208ENST00000563448 LY6EQ16553 131 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 SPNS3Q6ZMD2 512 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 TMEM219Q86XT9 240 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 OR2C3Q8N628 320 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 INO80EQ8NBZ0 244 aaPredicted RBP8.08□□□□□ -1.12
SMG1-208ENST00000563448 OR5B3Q8NH48 314 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 RBM14Q96PK6 669 aaKnown RBP8.08□□□□□ -1.12
SMG1-208ENST00000563448 AQP10Q96PS8 301 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 SLC25A33Q9BSK2 321 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 TMUB1Q9BVT8 246 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 HINT2Q9BX68 163 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 C1RLQ9NZP8 487 aa8.08□□□□□ -1.12
SMG1-208ENST00000563448 CACFD1Q9UGQ2 172 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms