RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 NXF2Q9GZY0 626 aaKnown RBP12.6□□□□□ -0.39
HDGFL3-203ENST00000563404 ATG5Q9H1Y0 275 aa12.6□□□□□ -0.39
HDGFL3-203ENST00000563404 TECRQ9NZ01 308 aaKnown RBP12.6□□□□□ -0.39
HDGFL3-203ENST00000563404 ZNF257Q9Y2Q1 563 aa12.6□□□□□ -0.39
HDGFL3-203ENST00000563404 OR2W1Q9Y3N9 320 aa12.6□□□□□ -0.39
HDGFL3-203ENST00000563404 KMT2AQ03164 3969 aa12.6□□□□□ -0.39
HDGFL3-203ENST00000563404 TMEM213A2RRL7 107 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 NPIPB5A8MRT5 1133 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 KBTBD11O94819 623 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 APOA1P02647 267 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 ZNF735P0CB33 412 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 MYOD1P15172 320 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 AREGP15514 252 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 CBLN1P23435 193 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 GPHB5Q86YW7 130 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 TMEM61Q8N0U2 210 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 TMEM167AQ8TBQ9 72 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 LGALS14Q8TCE9 139 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 GPHA2Q96T91 129 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 SLIRPQ9GZT3 109 aaKnown RBP12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 SLC2A9Q9NRM0 540 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 RHBDL2Q9NX52 303 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 MLXQ9UH92 298 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 PRELID3BQ9Y3B1 194 aa12.59□□□□□ -0.39
HDGFL3-203ENST00000563404 CRYGCP07315 174 aa12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 ARL3P36405 182 aa12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 RPL27AP46776 148 aaKnown RBP12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 KLK9Q2XQG4 91 aa12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 HACD4Q5VWC8 232 aa12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 CLEC19AQ6UXS0 136 aa12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 OR5H6Q8NGV6 325 aa12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 NUDCD2Q8WVJ2 157 aa12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 S100A16Q96FQ6 103 aaKnown RBP12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 FYTTD1Q96QD9 318 aaKnown RBP12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 OR2A7Q96R45 310 aa12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 DIABLOQ9NR28 239 aa12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 KLK9Q9UKQ9 250 aa12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 MRPS7Q9Y2R9 242 aaKnown RBP12.58□□□□□ -0.4
HDGFL3-203ENST00000563404 CGB1A6NKQ9 187 aa12.57□□□□□ -0.4
HDGFL3-203ENST00000563404 SSX5O60225 188 aa12.57□□□□□ -0.4
HDGFL3-203ENST00000563404 PSMB6P28072 239 aa12.57□□□□□ -0.4
HDGFL3-203ENST00000563404 FAM209BQ5JX69 171 aa12.57□□□□□ -0.4
HDGFL3-203ENST00000563404 UBE2NLQ5JXB2 153 aa12.57□□□□□ -0.4
HDGFL3-203ENST00000563404 OR4S2Q8NH73 311 aa12.57□□□□□ -0.4
HDGFL3-203ENST00000563404 TCTEX1D2Q8WW35 142 aa12.57□□□□□ -0.4
HDGFL3-203ENST00000563404 SLC25A38Q96DW6 304 aa12.57□□□□□ -0.4
HDGFL3-203ENST00000563404 OVOL2Q9BRP0 275 aa12.57□□□□□ -0.4
HDGFL3-203ENST00000563404 COMMD3Q9UBI1 195 aa12.57□□□□□ -0.4
HDGFL3-203ENST00000563404 TMEM235A6NFC5 223 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 A8MWP6 167 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 XRCC3O43542 346 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 SLC22A5O76082 557 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 REG1AP05451 166 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 CTXN2P0C2S0 81 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 CTRB1P17538 263 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 ZNF57Q68EA5 555 aaPredicted RBP12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 CTRB2Q6GPI1 263 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 CNIH2Q6PI25 160 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 MFSD4AQ8N468 514 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 SAMD12Q8N8I0 201 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 UXS1Q8NBZ7 420 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 VSTM2AQ8TAG5 236 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 RABL2AQ9UBK7 228 aaPredicted RBP12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 RABL2BQ9UNT1 228 aa12.56□□□□□ -0.4
HDGFL3-203ENST00000563404 DNAH10Q8IVF4 4471 aa12.55□□□□□ -0.4
HDGFL3-203ENST00000563404 ZNF320A2RRD8 509 aa12.55□□□□□ -0.4
HDGFL3-203ENST00000563404 MFSD2BA6NFX1 497 aa12.55□□□□□ -0.4
HDGFL3-203ENST00000563404 SCAF4O95104 1147 aaKnown RBP12.55□□□□□ -0.4
HDGFL3-203ENST00000563404 MAS1LP35410 378 aa12.55□□□□□ -0.4
HDGFL3-203ENST00000563404 TM4SF20Q53R12 229 aa12.55□□□□□ -0.4
HDGFL3-203ENST00000563404 UNQ9165/PRO28630Q6UXU0 137 aa12.55□□□□□ -0.4
HDGFL3-203ENST00000563404 LINC00299Q6ZSB3 139 aa12.55□□□□□ -0.4
HDGFL3-203ENST00000563404 SSX9Q7RTT3 188 aa12.55□□□□□ -0.4
HDGFL3-203ENST00000563404 SLC16A13Q7RTY0 426 aa12.55□□□□□ -0.4
HDGFL3-203ENST00000563404 MCFD2Q8NI22 146 aa12.55□□□□□ -0.4
HDGFL3-203ENST00000563404 HSD17B10Q99714 261 aaKnown RBP12.55□□□□□ -0.4
HDGFL3-203ENST00000563404 TAS2R8Q9NYW2 309 aa12.55□□□□□ -0.4
HDGFL3-203ENST00000563404 IGLV11-55A0A075B6I3 123 aa12.54□□□□□ -0.4
HDGFL3-203ENST00000563404 PTHLHP12272 177 aa12.54□□□□□ -0.4
HDGFL3-203ENST00000563404 BTNL8Q6UX41 500 aa12.54□□□□□ -0.4
HDGFL3-203ENST00000563404 OR52B4Q8NGK2 314 aa12.54□□□□□ -0.4
HDGFL3-203ENST00000563404 C15orf40Q8WUR7 153 aa12.54□□□□□ -0.4
HDGFL3-203ENST00000563404 EEF1AKMT3Q96AZ1 226 aa12.54□□□□□ -0.4
HDGFL3-203ENST00000563404 GGTLC1Q9BX51 225 aa12.54□□□□□ -0.4
HDGFL3-203ENST00000563404 ANXA10Q9UJ72 324 aa12.54□□□□□ -0.4
HDGFL3-203ENST00000563404 CTDSP2O14595 271 aa12.53□□□□□ -0.4
HDGFL3-203ENST00000563404 TNFSF12O43508 249 aa12.53□□□□□ -0.4
HDGFL3-203ENST00000563404 CLEC3BP05452 202 aa12.53□□□□□ -0.4
HDGFL3-203ENST00000563404 RPL8P62917 257 aaKnown RBP12.53□□□□□ -0.4
HDGFL3-203ENST00000563404 EWSR1Q01844 656 aaKnown RBP eCLIP12.53□□□□□ -0.4
HDGFL3-203ENST00000563404 FAM106AQ4KMX7 169 aa12.53□□□□□ -0.4
HDGFL3-203ENST00000563404 ZNF66Q6ZN08 573 aa12.53□□□□□ -0.4
HDGFL3-203ENST00000563404 LINC00476Q8WZB0 136 aa12.53□□□□□ -0.4
HDGFL3-203ENST00000563404 CCL28Q9NRJ3 127 aa12.53□□□□□ -0.4
HDGFL3-203ENST00000563404 LOC102724200A0A096LPH7 203 aaPredicted RBP12.52□□□□□ -0.41
HDGFL3-203ENST00000563404 HPGDSO60760 199 aa12.52□□□□□ -0.41
HDGFL3-203ENST00000563404 C8orf88P0DMB2 117 aa12.52□□□□□ -0.41
HDGFL3-203ENST00000563404 HLA-GP17693 338 aa12.52□□□□□ -0.41
HDGFL3-203ENST00000563404 ELK1P19419 428 aa12.52□□□□□ -0.41
HDGFL3-203ENST00000563404 GNG2P59768 71 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms