RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 MGLLQ99685 303 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 SIGMAR1Q99720 223 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 CMSS1Q9BQ75 279 aaKnown RBP1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 CCDC32Q9BV29 185 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 MIXL1Q9H2W2 232 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 FAM96AQ9H5X1 160 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 CXorf21Q9HAI6 301 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 NMNAT1Q9HAN9 279 aaPredicted RBP1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 ENY2Q9NPA8 101 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 COA4Q9NYJ1 87 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 GNG8Q9UK08 70 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 POLR1DQ9Y2S0 133 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 UFC1Q9Y3C8 167 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 FIS1Q9Y3D6 152 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 PCYT1BQ9Y5K3 369 aaPredicted RBP1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 TMEM56-RWDD3S4R434 201 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 RIMS1Q86UR5 1692 aaKnown RBP1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 KIF15Q9NS87 1388 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 CECR2Q9BXF3 1484 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 FAM135BQ49AJ0 1406 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 ERICH3Q5RHP9 1530 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 IGKV2-24A0A0C4DH68 120 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 LOC102725191A0A1B0GVB3 256 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 ARL5CA6NH57 179 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 C5orf58C9J3I9 102 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 TRAPPC2LH3BP13 241 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 K7ERU9 68 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 CYB5BO43169 146 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 GGCTO75223 188 aaKnown RBP1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 ATG12O94817 140 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 CPSF4O95639 269 aaKnown RBP1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 IGLV6-57P01721 117 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 ZNF25P17030 456 aaPredicted RBP1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 HIST1H1TP22492 207 aaPredicted RBP1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 OR10J1P30954 320 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 SERPINB10P48595 397 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 TPI1P60174 286 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 CKS1BP61024 79 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 GNG3P63215 75 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 MRPS10P82664 201 aaKnown RBP1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 PRDX4Q13162 271 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 CST6Q15828 149 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 HIST3H3Q16695 136 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 PYCR3Q53H96 274 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 TMEM97Q5BJF2 176 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 ACSBG2Q5FVE4 666 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 SAMD13Q5VXD3 122 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 DCUN1D2Q6PH85 259 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 ZFAND2AQ8N6M9 145 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 ZNF439Q8NDP4 499 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 OR8J3Q8NGG0 315 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 OR10D4PQ8NGN7 298 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 OR4K15Q8NH41 348 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 OR4K13Q8NH42 304 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 MCFD2Q8NI22 146 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 GPER1Q99527 375 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 GGACTQ9BVM4 153 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 TPT1P8Q9HAU6 139 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 NIT2Q9NQR4 276 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 UBQLN4Q9NRR5 601 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 MRPL16Q9NX20 251 aaKnown RBP1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 SPANXCQ9NY87 97 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 DOK5Q9P104 306 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 COPZ2Q9P299 210 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 OPTCQ9UBM4 332 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 UTP11Q9Y3A2 253 aaKnown RBP1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 WDR97A6NE52 1622 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 SNAPC4Q5SXM2 1469 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 SYNMO15061 1565 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 RB1CC1Q8TDY2 1594 aa1.68□□□□□ -2.14
SHCBP1-202ENST00000563219 SMG6Q86US8 1419 aaKnown RBP1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 KDM5BQ9UGL1 1544 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 DSCAML1Q8TD84 2053 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 SHANK3Q9BYB0 1731 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 MDFIC2A0A1B0GVS7 189 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 C9orf170A2RU37 121 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 C19orf71A6NCJ1 209 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 ZNF878C9JN71 531 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 D6RAR5 112 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 UBE2L6O14933 153 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 METTL15P1P0C7V9 234 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 SULT1A3P0DMM9 295 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 SULT1A4P0DMN0 295 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 SLC25A16P16260 332 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 MYL12AP19105 171 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 GZMHP20718 246 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 CRYBB3P26998 211 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 S100A7P31151 101 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 PIGPP57054 158 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 DNAJB13P59910 316 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 HTR4Q13639 388 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 SURF2Q15527 256 aaPredicted RBP1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 GRK1Q15835 563 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 KCNJ8Q15842 424 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 LRRC75BQ2VPJ9 315 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 MRPL51Q4U2R6 128 aaKnown RBP1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 TMEM128Q5BJH2 165 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 RASL11AQ6T310 242 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 CALHM3Q86XJ0 350 aa1.67□□□□□ -2.14
SHCBP1-202ENST00000563219 LRRC25Q8N386 305 aaPredicted RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms