RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 COA4Q9NYJ1 87 aa12.82□□□□□ -0.36
CDT1-202ENST00000562747 NDUFA13Q9P0J0 144 aa12.82□□□□□ -0.36
CDT1-202ENST00000562747 A0A0G2JLM5 398 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 ANKRD20A5PA0PJZ0 165 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 MARCH11A6NNE9 402 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 DISC1C4P0D8 188 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 UPK2O00526 184 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 OR8U8P0C7N1 319 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 ZNF735P0CB33 412 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 APELAP0DMC3 54 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 HLA-GP17693 338 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 PTBP1P26599 531 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDT1-202ENST00000562747 ECI1P42126 302 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 PPP5CP53041 499 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 RAB25P57735 213 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 SCGB2B2Q4G0G5 96 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 DEFB121Q5J5C9 76 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 SLC25A42Q86VD7 318 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 TTC9CQ8N5M4 171 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 OR1N2Q8NGR9 330 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 ZFAND1Q8TCF1 268 aa12.81□□□□□ -0.36
CDT1-202ENST00000562747 C13orf42A0A1B0GVH6 325 aa12.8□□□□□ -0.36
CDT1-202ENST00000562747 TEX22C9J3V5 150 aa12.8□□□□□ -0.36
CDT1-202ENST00000562747 PIGPP57054 158 aa12.8□□□□□ -0.36
CDT1-202ENST00000562747 EGFEM1PQ0D2K5 195 aa12.8□□□□□ -0.36
CDT1-202ENST00000562747 OR4C16Q8NGL9 310 aa12.8□□□□□ -0.36
CDT1-202ENST00000562747 DPF1Q92782 380 aa12.8□□□□□ -0.36
CDT1-202ENST00000562747 USMG5Q96IX5 58 aa12.8□□□□□ -0.36
CDT1-202ENST00000562747 ZNF257Q9Y2Q1 563 aa12.8□□□□□ -0.36
CDT1-202ENST00000562747 V9GYH0 126 aa12.8□□□□□ -0.36
CDT1-202ENST00000562747 NPIPB5A8MRT5 1133 aa12.79□□□□□ -0.36
CDT1-202ENST00000562747 E7EUB6 86 aa12.79□□□□□ -0.36
CDT1-202ENST00000562747 LINC01619G3V211 115 aa12.79□□□□□ -0.36
CDT1-202ENST00000562747 IGHV3-11P01762 117 aa12.79□□□□□ -0.36
CDT1-202ENST00000562747 HSPB1P04792 205 aaKnown RBP12.79□□□□□ -0.36
CDT1-202ENST00000562747 FAAP20Q6NZ36 180 aa12.79□□□□□ -0.36
CDT1-202ENST00000562747 CCDC190Q86UF4 302 aa12.79□□□□□ -0.36
CDT1-202ENST00000562747 FYTTD1Q96QD9 318 aaKnown RBP12.79□□□□□ -0.36
CDT1-202ENST00000562747 PRRT1Q99946 306 aa12.79□□□□□ -0.36
CDT1-202ENST00000562747 THAP7Q9BT49 309 aaPredicted RBP12.79□□□□□ -0.36
CDT1-202ENST00000562747 COMMD5Q9GZQ3 224 aa12.79□□□□□ -0.36
CDT1-202ENST00000562747 ALX4Q9H161 411 aaPredicted RBP12.79□□□□□ -0.36
CDT1-202ENST00000562747 TRAV3A0A0B4J244 114 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 A0A1B0GW64 132 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 DPPA5A6NC42 116 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 HMX3A6NHT5 357 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 KRASP01116 189 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 CTSDP07339 412 aaPredicted RBP12.78□□□□□ -0.36
CDT1-202ENST00000562747 RPA2P15927 270 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 PI3P19957 117 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 G6PCP35575 357 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 SURF2Q15527 256 aaPredicted RBP12.78□□□□□ -0.36
CDT1-202ENST00000562747 PYDC2Q56P42 97 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 THOC7Q6I9Y2 204 aaKnown RBP12.78□□□□□ -0.36
CDT1-202ENST00000562747 CCDC71LQ8N9Z2 235 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 OR13C8Q8NGS7 320 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 MARCH1Q8TCQ1 289 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 MRGPRFQ96AM1 343 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 WWC2-AS2Q96NR7 200 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 SRSF8Q9BRL6 282 aaKnown RBP12.78□□□□□ -0.36
CDT1-202ENST00000562747 SLC2A8Q9NY64 477 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 COPZ2Q9P299 210 aa12.78□□□□□ -0.36
CDT1-202ENST00000562747 IGHV4OR15-8A0A075B7B6 117 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 A0A087WW49 117 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 TRBV9A0A0B4J1U6 114 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 FAM223BA6NKX1 122 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 H0Y980 276 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 SERPINE2P07093 398 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 CRYGCP07315 174 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 MYOD1P15172 320 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 ETV6P41212 452 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 OR2B8PP59922 312 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 CD69Q07108 199 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 ZNF79Q15937 498 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 SPANXN2Q5MJ10 180 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 FAM223AQ8IWN6 122 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 Q8N402 240 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 TSC22D3Q99576 134 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 B9D2Q9BPU9 175 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 SCP2D1Q9UJQ7 156 aa12.77□□□□□ -0.37
CDT1-202ENST00000562747 C3orf85A0A1B0GTC6 90 aa12.76□□□□□ -0.37
CDT1-202ENST00000562747 CGB1A6NKQ9 187 aa12.76□□□□□ -0.37
CDT1-202ENST00000562747 B3GALNT1O75752 331 aa12.76□□□□□ -0.37
CDT1-202ENST00000562747 SNAPC5O75971 98 aa12.76□□□□□ -0.37
CDT1-202ENST00000562747 DHFRP00374 187 aa12.76□□□□□ -0.37
CDT1-202ENST00000562747 PSMB6P28072 239 aa12.76□□□□□ -0.37
CDT1-202ENST00000562747 AP3S2P59780 193 aa12.76□□□□□ -0.37
CDT1-202ENST00000562747 ZNF45Q02386 682 aa12.76□□□□□ -0.37
CDT1-202ENST00000562747 C9orf66Q5T8R8 295 aa12.76□□□□□ -0.37
CDT1-202ENST00000562747 ZNF343Q6P1L6 599 aa12.76□□□□□ -0.37
CDT1-202ENST00000562747 OR51S1Q8NGJ8 323 aa12.76□□□□□ -0.37
CDT1-202ENST00000562747 TRIM63Q969Q1 353 aa12.76□□□□□ -0.37
CDT1-202ENST00000562747 SEC22AQ96IW7 307 aa12.76□□□□□ -0.37
CDT1-202ENST00000562747 QTRT1Q9BXR0 403 aaKnown RBP12.76□□□□□ -0.37
CDT1-202ENST00000562747 RANGRFQ9HD47 186 aaPredicted RBP12.76□□□□□ -0.37
CDT1-202ENST00000562747 C14orf166Q9Y224 244 aaKnown RBP12.76□□□□□ -0.37
CDT1-202ENST00000562747 RBMXL2O75526 392 aaKnown RBP12.75□□□□□ -0.37
CDT1-202ENST00000562747 IGKV1-39P01597 117 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 PRH1P02810 166 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 IGKV1D-39P04432 117 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms