RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 SLC22A24Q8N4F4 322 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 C15orf53Q8NAA6 179 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 SGMS2Q8NHU3 365 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 C15orf41Q9Y2V0 281 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 TIMM22Q9Y584 194 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 MED12Q93074 2177 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 IGHV1-69-2A0A0G2JMI3 117 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 GOLGA8KD6RF30 607 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 GOLGA8MH3BSY2 632 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 M0QX08 132 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 LEPROTO15243 131 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 TYMSP04818 313 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 REG1AP05451 166 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 MSMBP08118 114 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 UBBP0CG47 229 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 S100A7P31151 101 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 REG1BP48304 166 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 FABP9Q0Z7S8 132 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 TNFAIP8L3Q5GJ75 292 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 C5orf46Q6UWT4 87 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 SSX8Q7RTT4 187 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 DYNAPQ8N1N2 210 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 C9orf163Q8N9P6 203 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 CFAP53Q96M91 514 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 UPF3BQ9BZI7 483 aaKnown RBP0.7□□□□□ -2.3
DENND4A-205ENST00000562540 MAP1LC3AQ9H492 121 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 PLEKHJ1Q9NW61 149 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 RSL24D1Q9UHA3 163 aaKnown RBP0.7□□□□□ -2.3
DENND4A-205ENST00000562540 ANAPC10Q9UM13 185 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 GMEB1Q9Y692 573 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 PXMP4Q9Y6I8 212 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 EML6Q6ZMW3 1958 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 FLT4P35916 1363 aa0.7□□□□□ -2.3
DENND4A-205ENST00000562540 NOTCH1P46531 2555 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 IBA57-AS1B1ANH7 110 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 DISC1C4P0D8 188 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 I3L521 148 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 SDCBPO00560 298 aaPredicted RBP0.69□□□□□ -2.3
DENND4A-205ENST00000562540 SLC22A1O15245 554 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 SULT1A3P0DMM9 295 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 SULT1A4P0DMN0 295 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 OR4D2P58180 307 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 BATFQ16520 125 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 NDUFA5Q16718 116 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 COMMD7Q86VX2 200 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 OR1M1Q8NGA1 313 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 OR5B17Q8NGF7 314 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 OR51I2Q9H344 312 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 FAM96AQ9H5X1 160 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 COQ4Q9Y3A0 265 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 SNURFQ9Y675 71 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 GPR98Q8WXG9 6306 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 KIF15Q9NS87 1388 aa0.69□□□□□ -2.3
DENND4A-205ENST00000562540 SCAF11Q99590 1463 aaKnown RBP0.68□□□□□ -2.3
DENND4A-205ENST00000562540 TRBV10-2A0A0K0K1G8 114 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 OR4C45A6NMZ5 311 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 COCHO43405 550 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 METTL15P1P0C7V9 234 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 KCNE1P15382 129 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 HLA-DMBP28068 263 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 FAM27BQ5VT28 67 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 DHFR2Q86XF0 187 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 FAM9CQ8IZT9 166 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 Q8N2B8 174 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 TMEM161BQ8NDZ6 487 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 ANKRD7Q92527 254 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 ODF3Q96PU9 254 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 IMP3Q9NV31 184 aaKnown RBP0.68□□□□□ -2.3
DENND4A-205ENST00000562540 PAQR5Q9NXK6 330 aaPredicted RBP0.68□□□□□ -2.3
DENND4A-205ENST00000562540 BAIAP2Q9UQB8 552 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 LHFPL6Q9Y693 200 aa0.68□□□□□ -2.3
DENND4A-205ENST00000562540 RALGAPA2Q2PPJ7 1873 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 TENM3Q9P273 2699 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 REREQ9P2R6 1566 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 TNRC6AQ8NDV7 1962 aaKnown RBP0.67□□□□□ -2.3
DENND4A-205ENST00000562540 FBN2P35556 2912 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 C1orf232A0A0U1RR37 186 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 LINC00854A0A1B0GVQ3 168 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 LST1O00453 97 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 ITGB1BP1O14713 200 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 NOS1APO75052 506 aaPredicted RBP0.67□□□□□ -2.3
DENND4A-205ENST00000562540 KRT75O95678 551 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 APOEP02649 317 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 PMP2P02689 132 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 SRP19P09132 144 aaKnown RBP0.67□□□□□ -2.3
DENND4A-205ENST00000562540 CCL1P22362 96 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 NFYAP23511 347 aaPredicted RBP0.67□□□□□ -2.3
DENND4A-205ENST00000562540 BLVRAP53004 296 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 FXYD2P54710 66 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 CTAG1AP78358 180 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 TNFAIP6P98066 277 aaPredicted RBP0.67□□□□□ -2.3
DENND4A-205ENST00000562540 MED21Q13503 144 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 RSU1Q15404 277 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 PDPK2PQ6A1A2 396 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 ROPN1LQ96C74 230 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 SERPINI1Q99574 410 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 REG4Q9BYZ8 158 aa0.67□□□□□ -2.3
DENND4A-205ENST00000562540 EML5Q05BV3 1969 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 ANAPC1Q9H1A4 1944 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 SCN3AQ9NY46 2000 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms