RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 SUPT4H1P63272 117 aaKnown RBP12.83□□□□□ -0.36
USB1-206ENST00000562534 SRPXP78539 464 aa12.83□□□□□ -0.36
USB1-206ENST00000562534 TMEM187Q14656 261 aa12.83□□□□□ -0.36
USB1-206ENST00000562534 ECSCRQ19T08 205 aa12.83□□□□□ -0.36
USB1-206ENST00000562534 C19orf54Q5BKX5 351 aa12.83□□□□□ -0.36
USB1-206ENST00000562534 CXorf66Q5JRM2 361 aaPredicted RBP12.83□□□□□ -0.36
USB1-206ENST00000562534 TMEM65Q6PI78 240 aa12.83□□□□□ -0.36
USB1-206ENST00000562534 C10orf99Q6UWK7 81 aa12.83□□□□□ -0.36
USB1-206ENST00000562534 FAM219AQ8IW50 185 aa12.83□□□□□ -0.36
USB1-206ENST00000562534 SELENOHQ8IZQ5 122 aaKnown RBP12.83□□□□□ -0.36
USB1-206ENST00000562534 C11orf44Q8N8P7 122 aa12.83□□□□□ -0.36
USB1-206ENST00000562534 OR4A16Q8NH70 328 aa12.83□□□□□ -0.36
USB1-206ENST00000562534 RBPMSQ93062 196 aaKnown RBP12.83□□□□□ -0.36
USB1-206ENST00000562534 ALX4Q9H161 411 aaPredicted RBP12.83□□□□□ -0.36
USB1-206ENST00000562534 PRNDQ9UKY0 176 aa12.83□□□□□ -0.36
USB1-206ENST00000562534 FOXA2Q9Y261 457 aaPredicted RBP12.83□□□□□ -0.36
USB1-206ENST00000562534 TRAV3A0A0B4J244 114 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 A0A1W2PN81 502 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 IGLV1-40P01703 118 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 VAMP1P23763 118 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 CHRNA7P36544 502 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 AKR1C2P52895 323 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 DEFA1P59665 94 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 DEFA3P59666 94 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 IFITM3Q01628 133 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 TCTEX1D4Q5JR98 221 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 NDUFA11Q86Y39 141 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 LGI3Q8N145 548 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 RNF152Q8N8N0 203 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 CITED2Q99967 270 aaPredicted RBP12.82□□□□□ -0.36
USB1-206ENST00000562534 TBC1D24Q9ULP9 559 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 TSSC4Q9Y5U2 329 aaPredicted RBP12.82□□□□□ -0.36
USB1-206ENST00000562534 PLXNB1O43157 2135 aa12.82□□□□□ -0.36
USB1-206ENST00000562534 TEX50A0A1B0GTY4 177 aa12.81□□□□□ -0.36
USB1-206ENST00000562534 SFT2D2O95562 160 aa12.81□□□□□ -0.36
USB1-206ENST00000562534 IGKV1-5P01602 117 aa12.81□□□□□ -0.36
USB1-206ENST00000562534 OR9G9P0C7N8 305 aa12.81□□□□□ -0.36
USB1-206ENST00000562534 PSMB8P28062 276 aa12.81□□□□□ -0.36
USB1-206ENST00000562534 RAB25P57735 213 aa12.81□□□□□ -0.36
USB1-206ENST00000562534 TMEM268Q5VZI3 342 aa12.81□□□□□ -0.36
USB1-206ENST00000562534 THOC7Q6I9Y2 204 aaKnown RBP12.81□□□□□ -0.36
USB1-206ENST00000562534 OR5T1Q8NG75 326 aa12.81□□□□□ -0.36
USB1-206ENST00000562534 OR1L8Q8NGR8 309 aa12.81□□□□□ -0.36
USB1-206ENST00000562534 OR5B3Q8NH48 314 aa12.81□□□□□ -0.36
USB1-206ENST00000562534 RNASE11Q8TAA1 199 aaKnown RBP12.81□□□□□ -0.36
USB1-206ENST00000562534 LSM10Q969L4 123 aaKnown RBP12.81□□□□□ -0.36
USB1-206ENST00000562534 FYTTD1Q96QD9 318 aaKnown RBP12.81□□□□□ -0.36
USB1-206ENST00000562534 SRSF8Q9BRL6 282 aaKnown RBP12.81□□□□□ -0.36
USB1-206ENST00000562534 FLVCR2Q9UPI3 526 aa12.81□□□□□ -0.36
USB1-206ENST00000562534 OR51B2Q9Y5P1 312 aa12.81□□□□□ -0.36
USB1-206ENST00000562534 H3BUA1 57 aa12.8□□□□□ -0.36
USB1-206ENST00000562534 RBMXL2O75526 392 aaKnown RBP12.8□□□□□ -0.36
USB1-206ENST00000562534 BRI3O95415 125 aa12.8□□□□□ -0.36
USB1-206ENST00000562534 TRAPPC2P0DI81 140 aa12.8□□□□□ -0.36
USB1-206ENST00000562534 TRAPPC2BP0DI82 140 aa12.8□□□□□ -0.36
USB1-206ENST00000562534 PF4V1P10720 104 aa12.8□□□□□ -0.36
USB1-206ENST00000562534 RAB9AP51151 201 aa12.8□□□□□ -0.36
USB1-206ENST00000562534 OR2B8PP59922 312 aa12.8□□□□□ -0.36
USB1-206ENST00000562534 PPP1R1AQ13522 171 aa12.8□□□□□ -0.36
USB1-206ENST00000562534 HSD17B13Q7Z5P4 300 aaPredicted RBP12.8□□□□□ -0.36
USB1-206ENST00000562534 TTC9CQ8N5M4 171 aa12.8□□□□□ -0.36
USB1-206ENST00000562534 SLA2Q9H6Q3 261 aa12.8□□□□□ -0.36
USB1-206ENST00000562534 TMEM14BQ9NUH8 114 aa12.8□□□□□ -0.36
USB1-206ENST00000562534 ZNF257Q9Y2Q1 563 aa12.8□□□□□ -0.36
USB1-206ENST00000562534 NSG2Q9Y328 171 aa12.8□□□□□ -0.36
USB1-206ENST00000562534 TNCP24821 2201 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 A0A0B4J2A0 478 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 DUXBA0A1W2PPF3 345 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 C15orf61A6NNL5 157 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 E7EUB6 86 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 M0QZ24 198 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 OR4E1P0C645 316 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 P0C879 139 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 CDX1P47902 265 aaPredicted RBP12.79□□□□□ -0.36
USB1-206ENST00000562534 C10orf55Q5SWW7 151 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 ASPHD1Q5U4P2 390 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 ZNF429Q86V71 674 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 LRTM2Q8N967 370 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 DUSP18Q8NEJ0 188 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 LHFPL5Q8TAF8 219 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 ENKURQ8TC29 256 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 QTRT1Q9BXR0 403 aaKnown RBP12.79□□□□□ -0.36
USB1-206ENST00000562534 C20orf85Q9H1P6 137 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 NDUFA4L2Q9NRX3 87 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.79□□□□□ -0.36
USB1-206ENST00000562534 ZNF355PQ9NSJ1 428 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 CACFD1Q9UGQ2 172 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 SHPKQ9UHJ6 478 aa12.79□□□□□ -0.36
USB1-206ENST00000562534 STAB1Q9NY15 2570 aa12.78□□□□□ -0.36
USB1-206ENST00000562534 A0A0B4J293 547 aa12.78□□□□□ -0.36
USB1-206ENST00000562534 C9orf170A2RU37 121 aa12.78□□□□□ -0.36
USB1-206ENST00000562534 TEX22C9J3V5 150 aa12.78□□□□□ -0.36
USB1-206ENST00000562534 SOX15O60248 233 aa12.78□□□□□ -0.36
USB1-206ENST00000562534 RPLP1P05386 114 aaKnown RBP12.78□□□□□ -0.36
USB1-206ENST00000562534 H2AFB2P0C5Z0 115 aa12.78□□□□□ -0.36
USB1-206ENST00000562534 ANXA7P20073 488 aaKnown RBP12.78□□□□□ -0.36
USB1-206ENST00000562534 HSPE1P61604 102 aaKnown RBP12.78□□□□□ -0.36
USB1-206ENST00000562534 C4orf46Q504U0 113 aa12.78□□□□□ -0.36
USB1-206ENST00000562534 SLC35G3Q8N808 338 aa12.78□□□□□ -0.36
USB1-206ENST00000562534 FAM110DQ8TAY7 271 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms