RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 PP6455Q8WZ26 134 aa11.12□□□□□ -0.63
CLK3-206ENST00000562078 ZNF442Q9H7R0 627 aa11.12□□□□□ -0.63
CLK3-206ENST00000562078 NAT8BQ9UHF3 227 aa11.12□□□□□ -0.63
CLK3-206ENST00000562078 SPTBN2O15020 2390 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 SAA2-SAA4A0A096LPE2 208 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 SPINK2P20155 84 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 GATA2P23769 480 aaPredicted RBP11.11□□□□□ -0.63
CLK3-206ENST00000562078 OR4P4Q8NGL7 312 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 OR1B1Q8NGR6 318 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 FGFBP3Q8TAT2 258 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 SFXN3Q9BWM7 321 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 DCHS1Q96JQ0 3298 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 MED12LQ86YW9 2145 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 IGKV1-12A0A0C4DH73 117 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 H0YJW9 148 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 PDE6DO43924 150 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 IGKV1D-12P01611 117 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 SCTP09683 121 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 PPIAL4GP0DN37 164 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 PSG2P11465 335 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 PLGLB1Q02325 96 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 IGFBP7Q16270 282 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 ZNF324BQ6AW86 544 aaPredicted RBP11.11□□□□□ -0.63
CLK3-206ENST00000562078 TMEM251Q8N6I4 163 aa11.11□□□□□ -0.63
CLK3-206ENST00000562078 H0Y980 276 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 PGLYRP1O75594 196 aaPredicted RBP11.1□□□□□ -0.63
CLK3-206ENST00000562078 IGLC1P0CG04 106 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 SRIP30626 198 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 SLC35B1P78383 322 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 OR10J3Q5JRS4 329 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 OR10P1Q8NGE3 313 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 QTRT1Q9BXR0 403 aaKnown RBP11.1□□□□□ -0.63
CLK3-206ENST00000562078 K7EN84 100 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 SIRPB1O00241 398 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 RAMP3O60896 148 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 CCL11P51671 97 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 C3AR1Q16581 482 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 C19orf35Q6ZS72 473 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 SPATA12Q7Z6I5 190 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 OR8I2Q8N0Y5 310 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 OR2H1Q9GZK4 316 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 CLEC5AQ9NY25 188 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 IL36GQ9NZH8 169 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 TIMM9Q9Y5J7 89 aa11.1□□□□□ -0.63
CLK3-206ENST00000562078 DEGS1O15121 323 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 MRPL33O75394 65 aaKnown RBP11.09□□□□□ -0.63
CLK3-206ENST00000562078 CA7P43166 264 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 MEOX1P50221 254 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 SELENOVP59797 346 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 TFF3Q07654 80 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 C9orf135Q5VTT2 229 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 Q6ZSR3 168 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 C5orf17Q8NAS9 161 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 RDH5Q92781 318 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 TNRC6AQ8NDV7 1962 aaKnown RBP11.09□□□□□ -0.63
CLK3-206ENST00000562078 M0R1X1 148 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 KLK10O43240 276 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 SERPINE2P07093 398 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 RPS16P62249 146 aaKnown RBP11.09□□□□□ -0.63
CLK3-206ENST00000562078 HTD2P86397 168 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 DEFB109BQ30KR1 87 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 EBLN2Q6P2I7 272 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 OSR2Q8N2R0 312 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 TMEM45BQ96B21 275 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 SPSB1Q96BD6 273 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 SCNM1Q9BWG6 230 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 GNB1LQ9BYB4 327 aa11.09□□□□□ -0.63
CLK3-206ENST00000562078 CFAP47Q6ZTR5 3102 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 IGKV3D-15A0A087WSY6 115 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 SCO2A0A1W2PP80 73 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 CD300LBA8K4G0 201 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 REG1AP05451 166 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 COX5AP20674 150 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 F2RP25116 425 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 MALLQ13021 153 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 PLCXD3Q63HM9 321 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 TCF24Q7RTU0 167 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 TUSC5Q8IXB3 177 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 OR1L1Q8NH94 360 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 GP6Q9HCN6 339 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 CRIM1Q9NZV1 1036 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 FRYQ5TBA9 3013 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 PDCD6O75340 191 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 OR7C1O76099 320 aaPredicted RBP11.08□□□□□ -0.64
CLK3-206ENST00000562078 IGKV1-39P01597 117 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 IGKV1D-39P04432 117 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 SP1P08047 785 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 PCBD1P61457 104 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 RHOBP62745 196 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 OR8B8Q15620 311 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 GCSAMLQ5JQS6 135 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 TMEM211Q6ICI0 200 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 MDS2Q8NDY4 140 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 C10orf35Q96D05 121 aa11.08□□□□□ -0.64
CLK3-206ENST00000562078 KLF13Q9Y2Y9 288 aaPredicted RBP11.08□□□□□ -0.64
CLK3-206ENST00000562078 TRAV9-1A0A075B6T8 112 aa11.07□□□□□ -0.64
CLK3-206ENST00000562078 BMPR1BO00238 502 aa11.07□□□□□ -0.64
CLK3-206ENST00000562078 SSTR5P35346 364 aa11.07□□□□□ -0.64
CLK3-206ENST00000562078 RPEL1Q2QD12 228 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms