RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 OR52I2Q8NH67 350 aa11.86□□□□□ -0.51
CCDC113-203ENST00000561517 DYNC2LI1Q8TCX1 351 aa11.86□□□□□ -0.51
CCDC113-203ENST00000561517 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
CCDC113-203ENST00000561517 FAM212BQ9NTI7 297 aaPredicted RBP11.86□□□□□ -0.51
CCDC113-203ENST00000561517 TMEM140Q9NV12 185 aa11.86□□□□□ -0.51
CCDC113-203ENST00000561517 MTFP1Q9UDX5 166 aa11.86□□□□□ -0.51
CCDC113-203ENST00000561517 M0QYG6 137 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 CTDSP2O14595 271 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 AREGP15514 252 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 CTRB1P17538 263 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 PSMB6P28072 239 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 LPAR6P43657 344 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 OR2B8PP59922 312 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 EXOSC2Q13868 293 aaKnown RBP11.85□□□□□ -0.51
CCDC113-203ENST00000561517 CTRB2Q6GPI1 263 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 DMBX1Q8NFW5 382 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 FCAMRQ8WWV6 532 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 FANCD2OSQ96PS1 177 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 OR4C12Q96R67 309 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 B9D2Q9BPU9 175 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 ELOVL1Q9BW60 279 aa11.85□□□□□ -0.51
CCDC113-203ENST00000561517 CCDC59Q9P031 241 aaKnown RBP11.85□□□□□ -0.51
CCDC113-203ENST00000561517 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.84□□□□□ -0.51
CCDC113-203ENST00000561517 DPPA5A6NC42 116 aa11.84□□□□□ -0.51
CCDC113-203ENST00000561517 MARCH11A6NNE9 402 aa11.84□□□□□ -0.51
CCDC113-203ENST00000561517 RGS5O15539 181 aa11.84□□□□□ -0.51
CCDC113-203ENST00000561517 OR2J3O76001 311 aa11.84□□□□□ -0.51
CCDC113-203ENST00000561517 TBPP20226 339 aa11.84□□□□□ -0.51
CCDC113-203ENST00000561517 ERVK-16P61578 105 aa11.84□□□□□ -0.51
CCDC113-203ENST00000561517 C15orf32Q32M92 178 aa11.84□□□□□ -0.51
CCDC113-203ENST00000561517 PHLDA2Q53GA4 152 aa11.84□□□□□ -0.51
CCDC113-203ENST00000561517 RNASE12Q5GAN4 147 aaKnown RBP11.84□□□□□ -0.51
CCDC113-203ENST00000561517 FAM209BQ5JX69 171 aa11.84□□□□□ -0.51
CCDC113-203ENST00000561517 C19orf35Q6ZS72 473 aa11.84□□□□□ -0.51
CCDC113-203ENST00000561517 LAX1Q8IWV1 398 aa11.84□□□□□ -0.51
CCDC113-203ENST00000561517 SLC38A6Q8IZM9 456 aa11.84□□□□□ -0.51
CCDC113-203ENST00000561517 OR6Q1Q8NGQ2 317 aa11.84□□□□□ -0.51
CCDC113-203ENST00000561517 SRSF8Q9BRL6 282 aaKnown RBP11.84□□□□□ -0.51
CCDC113-203ENST00000561517 IGLC7A0M8Q6 106 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 BMPR1BO00238 502 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 DHFRP00374 187 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 CD74P04233 296 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 CD3DP04234 171 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 SPNP16150 400 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 S100GP29377 79 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 SYNJ2BPP57105 145 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 RPEL1Q2QD12 228 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 RNASE10Q5GAN6 216 aaKnown RBP11.83□□□□□ -0.52
CCDC113-203ENST00000561517 IL34Q6ZMJ4 242 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 LHFPL1Q86WI0 220 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 ARRDC1Q8N5I2 433 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 OR9G4Q8NGQ1 327 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 COMMD5Q9GZQ3 224 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 FBXL7Q9UJT9 491 aa11.83□□□□□ -0.52
CCDC113-203ENST00000561517 GABARAPH6UMI1 98 aa11.82□□□□□ -0.52
CCDC113-203ENST00000561517 LY86O95711 162 aa11.82□□□□□ -0.52
CCDC113-203ENST00000561517 KRASP01116 189 aa11.82□□□□□ -0.52
CCDC113-203ENST00000561517 IGLV1-51P01701 117 aa11.82□□□□□ -0.52
CCDC113-203ENST00000561517 IFNA6P05013 189 aa11.82□□□□□ -0.52
CCDC113-203ENST00000561517 RPA2P15927 270 aa11.82□□□□□ -0.52
CCDC113-203ENST00000561517 HIST1H1BP16401 226 aaKnown RBP11.82□□□□□ -0.52
CCDC113-203ENST00000561517 PTBP1P26599 531 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCDC113-203ENST00000561517 RND3P61587 244 aa11.82□□□□□ -0.52
CCDC113-203ENST00000561517 MRPS10P82664 201 aaKnown RBP11.82□□□□□ -0.52
CCDC113-203ENST00000561517 SSBP1Q04837 148 aaKnown RBP11.82□□□□□ -0.52
CCDC113-203ENST00000561517 THOC7Q6I9Y2 204 aaKnown RBP11.82□□□□□ -0.52
CCDC113-203ENST00000561517 TBC1D26Q86UD7 250 aa11.82□□□□□ -0.52
CCDC113-203ENST00000561517 TMEM229BQ8NBD8 167 aa11.82□□□□□ -0.52
CCDC113-203ENST00000561517 QTRT1Q9BXR0 403 aaKnown RBP11.82□□□□□ -0.52
CCDC113-203ENST00000561517 DMRT1Q9Y5R6 373 aa11.82□□□□□ -0.52
CCDC113-203ENST00000561517 DNAH9Q9NYC9 4486 aa11.82□□□□□ -0.52
CCDC113-203ENST00000561517 IGLV11-55A0A075B6I3 123 aa11.81□□□□□ -0.52
CCDC113-203ENST00000561517 TEX50A0A1B0GTY4 177 aa11.81□□□□□ -0.52
CCDC113-203ENST00000561517 H3BMQ9 156 aa11.81□□□□□ -0.52
CCDC113-203ENST00000561517 NDUFB8O95169 186 aa11.81□□□□□ -0.52
CCDC113-203ENST00000561517 REG1AP05451 166 aa11.81□□□□□ -0.52
CCDC113-203ENST00000561517 G6PCP35575 357 aa11.81□□□□□ -0.52
CCDC113-203ENST00000561517 TAS2R19P59542 299 aa11.81□□□□□ -0.52
CCDC113-203ENST00000561517 CD69Q07108 199 aa11.81□□□□□ -0.52
CCDC113-203ENST00000561517 TATDN3Q17R31 274 aa11.81□□□□□ -0.52
CCDC113-203ENST00000561517 OR1L8Q8NGR8 309 aa11.81□□□□□ -0.52
CCDC113-203ENST00000561517 ISOC1Q96CN7 298 aa11.81□□□□□ -0.52
CCDC113-203ENST00000561517 ZNF486Q96H40 463 aaPredicted RBP11.81□□□□□ -0.52
CCDC113-203ENST00000561517 SLIRPQ9GZT3 109 aaKnown RBP11.81□□□□□ -0.52
CCDC113-203ENST00000561517 SIGLEC8Q9NYZ4 499 aa11.81□□□□□ -0.52
CCDC113-203ENST00000561517 RABL2AQ9UBK7 228 aaPredicted RBP11.81□□□□□ -0.52
CCDC113-203ENST00000561517 RABL2BQ9UNT1 228 aa11.81□□□□□ -0.52
CCDC113-203ENST00000561517 CTDSPLO15194 276 aa11.8□□□□□ -0.52
CCDC113-203ENST00000561517 NOL3O60936 208 aaKnown RBP11.8□□□□□ -0.52
CCDC113-203ENST00000561517 IGKV1-39P01597 117 aa11.8□□□□□ -0.52
CCDC113-203ENST00000561517 IGKV1D-39P04432 117 aa11.8□□□□□ -0.52
CCDC113-203ENST00000561517 CSN3P07498 182 aa11.8□□□□□ -0.52
CCDC113-203ENST00000561517 TRAPPC2P0DI81 140 aa11.8□□□□□ -0.52
CCDC113-203ENST00000561517 TRAPPC2BP0DI82 140 aa11.8□□□□□ -0.52
CCDC113-203ENST00000561517 GP9P14770 177 aa11.8□□□□□ -0.52
CCDC113-203ENST00000561517 HSD17B13Q7Z5P4 300 aaPredicted RBP11.8□□□□□ -0.52
CCDC113-203ENST00000561517 OR4D10Q8NGI6 311 aa11.8□□□□□ -0.52
CCDC113-203ENST00000561517 SMIM4Q8WVI0 70 aa11.8□□□□□ -0.52
CCDC113-203ENST00000561517 DIRAS2Q96HU8 199 aa11.8□□□□□ -0.52
CCDC113-203ENST00000561517 SEC22AQ96IW7 307 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms