RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 I3L521 148 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 SLC22A1O15245 554 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 KRT75O95678 551 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 HLA-DMBP28068 263 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 CDK10Q15131 360 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 TNFAIP8L2Q6P589 184 aaPredicted RBP0.75□□□□□ -2.29
USP8-218ENST00000561330 HIST2H3AQ71DI3 136 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 GID4Q8IVV7 300 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 C12orf29Q8N999 325 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 ZNF565Q8N9K5 539 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 ANKRD7Q92527 254 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 ERMAPQ96PL5 475 aaPredicted RBP0.75□□□□□ -2.29
USP8-218ENST00000561330 SERPINI1Q99574 410 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 YIPF3Q9GZM5 350 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 RSL24D1Q9UHA3 163 aaKnown RBP0.75□□□□□ -2.29
USP8-218ENST00000561330 NAV1Q8NEY1 1877 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 ARFGEF3Q5TH69 2177 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 MYOFQ9NZM1 2061 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 KIF15Q9NS87 1388 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 RAD50Q92878 1312 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 TMEM212A6NML5 194 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 PMP2P02689 132 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 IL3P08700 152 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 METTL15P1P0C7V9 234 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 S100A7P31151 101 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 POLR2GP62487 172 aaKnown RBP eCLIP0.74□□□□□ -2.29
USP8-218ENST00000561330 MGAT3Q09327 533 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 TNFAIP8L3Q5GJ75 292 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 OR1M1Q8NGA1 313 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 OR5B17Q8NGF7 314 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 MRPL57Q9BQC6 102 aaKnown RBP0.74□□□□□ -2.29
USP8-218ENST00000561330 OR8D2Q9GZM6 311 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 TRABDQ9H4I3 376 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 FKBP14Q9NWM8 211 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 DKKL1Q9UK85 242 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 BAIAP2Q9UQB8 552 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 POLR1DQ9Y2S0 133 aa0.74□□□□□ -2.29
USP8-218ENST00000561330 CPAMD8Q8IZJ3 1885 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 LST1O00453 97 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 HLA-DRAP01903 254 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 OCMP0CE72 109 aaPredicted RBP0.73□□□□□ -2.29
USP8-218ENST00000561330 NFYAP23511 347 aaPredicted RBP0.73□□□□□ -2.29
USP8-218ENST00000561330 FXYD2P54710 66 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 OR4D2P58180 307 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 ZNF345Q14585 488 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 C1orf194Q5T5A4 169 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 TEX36Q5VZQ5 186 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 SLC51BQ86UW2 128 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 TMEM251Q8N6I4 163 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 ZNF439Q8NDP4 499 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 DNAJB3Q8WWF6 145 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 KCTD7Q96MP8 289 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 C7orf50Q9BRJ6 194 aaKnown RBP0.73□□□□□ -2.29
USP8-218ENST00000561330 OR5AC2Q9NZP5 309 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 PCDH15Q96QU1 1955 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 GLI3P10071 1580 aa0.73□□□□□ -2.29
USP8-218ENST00000561330 SYNRGQ9UMZ2 1314 aa0.72□□□□□ -2.29
USP8-218ENST00000561330 TRAV14DV4A0A0A6YYC5 116 aa0.72□□□□□ -2.29
USP8-218ENST00000561330 IRGMA1A4Y4 181 aa0.72□□□□□ -2.29
USP8-218ENST00000561330 FABP12A6NFH5 140 aa0.72□□□□□ -2.29
USP8-218ENST00000561330 OR4C45A6NMZ5 311 aa0.72□□□□□ -2.29
USP8-218ENST00000561330 C21orf140B9A014 251 aa0.72□□□□□ -2.29
USP8-218ENST00000561330 DISC1C4P0D8 188 aa0.72□□□□□ -2.29
USP8-218ENST00000561330 F5H768 121 aa0.72□□□□□ -2.29
USP8-218ENST00000561330 IGHV3-7P01780 117 aa0.72□□□□□ -2.29
USP8-218ENST00000561330 RNASE3P12724 160 aaKnown RBP0.72□□□□□ -2.29
USP8-218ENST00000561330 TNFAIP6P98066 277 aaPredicted RBP0.72□□□□□ -2.29
USP8-218ENST00000561330 PPP1R1AQ13522 171 aa0.72□□□□□ -2.29
USP8-218ENST00000561330 PXMP4Q9Y6I8 212 aa0.72□□□□□ -2.29
USP8-218ENST00000561330 GGT3PA6NGU5 568 aa0.71□□□□□ -2.3
USP8-218ENST00000561330 NOS1APO75052 506 aaPredicted RBP0.71□□□□□ -2.3
USP8-218ENST00000561330 REG1AP05451 166 aa0.71□□□□□ -2.3
USP8-218ENST00000561330 PSMB6P28072 239 aa0.71□□□□□ -2.3
USP8-218ENST00000561330 RUNX1Q01196 453 aa0.71□□□□□ -2.3
USP8-218ENST00000561330 FABP9Q0Z7S8 132 aa0.71□□□□□ -2.3
USP8-218ENST00000561330 CLEC6AQ6EIG7 209 aa0.71□□□□□ -2.3
USP8-218ENST00000561330 Q8N402 240 aa0.71□□□□□ -2.3
USP8-218ENST00000561330 TMEM161BQ8NDZ6 487 aa0.71□□□□□ -2.3
USP8-218ENST00000561330 FUT9Q9Y231 359 aa0.71□□□□□ -2.3
USP8-218ENST00000561330 MICAL3Q7RTP6 2002 aa0.71□□□□□ -2.3
USP8-218ENST00000561330 EIF4G1Q04637 1599 aaKnown RBP0.7□□□□□ -2.3
USP8-218ENST00000561330 GOLGA8MH3BSY2 632 aa0.7□□□□□ -2.3
USP8-218ENST00000561330 C1QAP02745 245 aa0.7□□□□□ -2.3
USP8-218ENST00000561330 SRP19P09132 144 aaKnown RBP0.7□□□□□ -2.3
USP8-218ENST00000561330 CCL1P22362 96 aa0.7□□□□□ -2.3
USP8-218ENST00000561330 CST9Q5W186 159 aa0.7□□□□□ -2.3
USP8-218ENST00000561330 AQP3Q92482 292 aa0.7□□□□□ -2.3
USP8-218ENST00000561330 OR51I2Q9H344 312 aa0.7□□□□□ -2.3
USP8-218ENST00000561330 PAQR5Q9NXK6 330 aaPredicted RBP0.7□□□□□ -2.3
USP8-218ENST00000561330 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.69□□□□□ -2.3
USP8-218ENST00000561330 FAM25EA8MYX2 175 aa0.69□□□□□ -2.3
USP8-218ENST00000561330 SSNA1O43805 119 aa0.69□□□□□ -2.3
USP8-218ENST00000561330 CALUO43852 315 aaPredicted RBP0.69□□□□□ -2.3
USP8-218ENST00000561330 SHBGP04278 402 aa0.69□□□□□ -2.3
USP8-218ENST00000561330 BATFQ16520 125 aa0.69□□□□□ -2.3
USP8-218ENST00000561330 OR4C6Q8NH72 309 aa0.69□□□□□ -2.3
USP8-218ENST00000561330 ROPN1LQ96C74 230 aa0.69□□□□□ -2.3
USP8-218ENST00000561330 C15orf41Q9Y2V0 281 aa0.69□□□□□ -2.3
USP8-218ENST00000561330 YEATS4O95619 227 aa0.68□□□□□ -2.3
USP8-218ENST00000561330 FGF6P10767 208 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms