RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CRYGCP07315 174 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 IGHV4-30-4P0DP06 118 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 CTRB1P17538 263 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 HLA-DMAP28067 261 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 OR2B8PP59922 312 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 CTRB2Q6GPI1 263 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 GPX8Q8TED1 209 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 BORCS5Q969J3 196 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 RCHY1Q96PM5 261 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 AIFM2Q9BRQ8 373 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 PLEKHA2Q9HB19 425 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 COMMD9Q9P000 198 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 PEMTQ9UBM1 199 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 IGLC7A0M8Q6 106 aa13.06□□□□□ -0.32
CDC42BPB-208ENST00000561271 H0Y980 276 aa13.06□□□□□ -0.32
CDC42BPB-208ENST00000561271 ELK1P19419 428 aa13.06□□□□□ -0.32
CDC42BPB-208ENST00000561271 EDN2P20800 178 aa13.06□□□□□ -0.32
CDC42BPB-208ENST00000561271 LCN12Q6JVE5 192 aa13.06□□□□□ -0.32
CDC42BPB-208ENST00000561271 DHRS11Q6UWP2 260 aa13.06□□□□□ -0.32
CDC42BPB-208ENST00000561271 SGPP2Q8IWX5 399 aa13.06□□□□□ -0.32
CDC42BPB-208ENST00000561271 CD300LFQ8TDQ1 290 aa13.06□□□□□ -0.32
CDC42BPB-208ENST00000561271 DMRT1Q9Y5R6 373 aa13.06□□□□□ -0.32
CDC42BPB-208ENST00000561271 IGLV11-55A0A075B6I3 123 aa13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 MFSD2BA6NFX1 497 aa13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 PGLYRP1O75594 196 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 DHFRP00374 187 aa13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 DEFA4P12838 97 aa13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 ERVK-16P61578 105 aa13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 PHLDA2Q53GA4 152 aa13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 RNASE12Q5GAN4 147 aaKnown RBP13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 CLEC19AQ6UXS0 136 aa13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 ADAMTSL5Q6ZMM2 481 aa13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 LYSMD2Q8IV50 215 aa13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 Q8N402 240 aa13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 THAP7Q9BT49 309 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 COMMD5Q9GZQ3 224 aa13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 SIGLEC8Q9NYZ4 499 aa13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 DNAH7Q8WXX0 4024 aa13.05□□□□□ -0.32
CDC42BPB-208ENST00000561271 SMIM31A0A1B0GVY4 71 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 MARCH11A6NNE9 402 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 GPR31O00270 319 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 GGCTO75223 188 aaKnown RBP13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 GABARAPO95166 117 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 F2RP25116 425 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 ARL3P36405 182 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 FAM209BQ5JX69 171 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 OR10W1Q8NGF6 305 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 OR6F1Q8NGZ6 308 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 DYNLRB2Q8TF09 96 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 FCAMRQ8WWV6 532 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 EEF1AKMT3Q96AZ1 226 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 CMTM3Q96MX0 182 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 QTRT1Q9BXR0 403 aaKnown RBP13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 SCPEP1Q9HB40 452 aa13.04□□□□□ -0.32
CDC42BPB-208ENST00000561271 OR2C1O95371 312 aa13.03□□□□□ -0.32
CDC42BPB-208ENST00000561271 HIST1H1BP16401 226 aaKnown RBP13.03□□□□□ -0.32
CDC42BPB-208ENST00000561271 RCVRNP35243 200 aa13.03□□□□□ -0.32
CDC42BPB-208ENST00000561271 LPAR6P43657 344 aa13.03□□□□□ -0.32
CDC42BPB-208ENST00000561271 RORCP51449 518 aa13.03□□□□□ -0.32
CDC42BPB-208ENST00000561271 CTF1Q16619 201 aa13.03□□□□□ -0.32
CDC42BPB-208ENST00000561271 GTSCR1Q86UQ5 136 aa13.03□□□□□ -0.32
CDC42BPB-208ENST00000561271 CMTM1Q8IZ96 169 aa13.03□□□□□ -0.32
CDC42BPB-208ENST00000561271 CACNG8Q8WXS5 425 aa13.03□□□□□ -0.32
CDC42BPB-208ENST00000561271 DGCR14Q96DF8 476 aaKnown RBP13.03□□□□□ -0.32
CDC42BPB-208ENST00000561271 SELENOKQ9Y6D0 94 aa13.03□□□□□ -0.32
CDC42BPB-208ENST00000561271 C2orf70A6NJV1 201 aa13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 FAM25AB3EWG3 89 aa13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 FAM25CB3EWG5 89 aa13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 FAM25GB3EWG6 89 aa13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 KRASP01116 189 aa13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 G6PCP35575 357 aa13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 MECP2P51608 486 aaKnown RBP13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 TSPAN5P62079 268 aa13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 KLK9Q2XQG4 91 aa13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 CD300EQ496F6 205 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 ZNF585BQ52M93 769 aa13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 ZC4H2Q9NQZ6 224 aa13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 C19orf73Q9NVV2 129 aa13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 KLK9Q9UKQ9 250 aa13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 NSG2Q9Y328 171 aa13.02□□□□□ -0.33
CDC42BPB-208ENST00000561271 A8MZ25 164 aa13.01□□□□□ -0.33
CDC42BPB-208ENST00000561271 M0QYG6 137 aa13.01□□□□□ -0.33
CDC42BPB-208ENST00000561271 GPR183P32249 361 aa13.01□□□□□ -0.33
CDC42BPB-208ENST00000561271 GPR107Q5VW38 600 aa13.01□□□□□ -0.33
CDC42BPB-208ENST00000561271 MZT2AQ6P582 158 aa13.01□□□□□ -0.33
CDC42BPB-208ENST00000561271 OR2K2Q8NGT1 345 aa13.01□□□□□ -0.33
CDC42BPB-208ENST00000561271 SRSF8Q9BRL6 282 aaKnown RBP13.01□□□□□ -0.33
CDC42BPB-208ENST00000561271 TM2D3Q9BRN9 247 aa13.01□□□□□ -0.33
CDC42BPB-208ENST00000561271 HINT2Q9BX68 163 aa13.01□□□□□ -0.33
CDC42BPB-208ENST00000561271 ZMAT4Q9H898 229 aa13.01□□□□□ -0.33
CDC42BPB-208ENST00000561271 TEX50A0A1B0GTY4 177 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 LGALS9O00182 355 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 FGF2P09038 288 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 TRAPPC2P0DI81 140 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 TRAPPC2BP0DI82 140 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 OR13C7P0DN81 318 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 FOLR2P14207 255 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 CD81P60033 236 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 WT1-ASQ06250 92 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 THOC7Q6I9Y2 204 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms