RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 F2RL1P55085 397 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 HILS1P60008 231 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 RPL15P61313 204 aaKnown RBP4.34□□□□□ -1.71
ZEB1-220ENST00000560909 SSBP2P81877 361 aaPredicted RBP4.34□□□□□ -1.71
ZEB1-220ENST00000560909 SLC9A3R2Q15599 337 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 PRSS8Q16651 343 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 C5orf64Q2M2E5 130 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 C2orf68Q2NKX9 166 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 KLK9Q2XQG4 91 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 TMEM268Q5VZI3 342 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 GGNBP1Q5YKI7 109 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 Q6ZRM9 215 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 LYZL2Q7Z4W2 148 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 ZNF429Q86V71 674 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 Q8N2B8 174 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 SLC35G3Q8N808 338 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 Q8N9W7 124 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 OR52E5Q8NH55 327 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 COQ8AQ8NI60 647 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 VSTM2AQ8TAG5 236 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 ASB13Q8WXK3 278 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 GPR146Q96CH1 333 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 R3HDM4Q96D70 268 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 HARBI1Q96MB7 349 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 PHB2Q99623 299 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 BEX1Q9HBH7 125 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 TMEM14BQ9NUH8 114 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 C1RLQ9NZP8 487 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 CACFD1Q9UGQ2 172 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 PITPNC1Q9UKF7 332 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 KLK9Q9UKQ9 250 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 SIGLEC9Q9Y336 463 aa4.34□□□□□ -1.71
ZEB1-220ENST00000560909 HMX3A6NHT5 357 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 FAM90A26D6RGX4 464 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 H3BUX3 64 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 H7C2Y5 167 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 NBR2O15453 112 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 CHST1O43916 411 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 KBTBD11O94819 623 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 KRASP01116 189 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 IGHV4-59P01825 116 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 HLA-DRB1P01911 266 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 SAA1P0DJI8 122 aaPredicted RBP4.33□□□□□ -1.72
ZEB1-220ENST00000560909 TMEM11P17152 192 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 CD24P25063 80 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 CNTFRP26992 372 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 MAS1LP35410 378 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 G6PCP35575 357 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 RRAS2P62070 204 aaPredicted RBP4.33□□□□□ -1.72
ZEB1-220ENST00000560909 RPS16P62249 146 aaKnown RBP4.33□□□□□ -1.72
ZEB1-220ENST00000560909 CBX3Q13185 183 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 VMA21Q3ZAQ7 101 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 OR2B11Q5JQS5 317 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 OR4A47Q6IF82 309 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 ZNF562Q6V9R5 426 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 IL17RELQ6ZVW7 336 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 PPP1R27Q86WC6 154 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 ZNF695Q8IW36 515 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 MMD2Q8IY49 270 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 SIGLECL1Q8N7X8 197 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 C5orf56Q8N8D9 126 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 OR11H7Q8NGC8 314 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 OR4D5Q8NGN0 318 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 OR5M8Q8NGP6 311 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 CASTOR1Q8WTX7 329 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 RBMXL1Q96E39 390 aaKnown RBP4.33□□□□□ -1.72
ZEB1-220ENST00000560909 OR10C1Q96KK4 312 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 SRSF8Q9BRL6 282 aaKnown RBP4.33□□□□□ -1.72
ZEB1-220ENST00000560909 ESM1Q9NQ30 184 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 TMEM140Q9NV12 185 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 VPREB3Q9UKI3 123 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 FOXA2Q9Y261 457 aaPredicted RBP4.33□□□□□ -1.72
ZEB1-220ENST00000560909 ZNF257Q9Y2Q1 563 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 MOB4Q9Y3A3 225 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 PLXNB1O43157 2135 aa4.33□□□□□ -1.72
ZEB1-220ENST00000560909 CUBNO60494 3623 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 IGHV7-81A0A0B4J1V7 117 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 TRAV3A0A0B4J244 114 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 A0A1B0GVG6 124 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 A0A1B0GW64 132 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 CGB1A6NKQ9 187 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 C15orf61A6NNL5 157 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 MPTX1A8MV57 137 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 FCN1O00602 326 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 HOXA3O43365 443 aaPredicted RBP4.32□□□□□ -1.72
ZEB1-220ENST00000560909 SLC25A17O43808 307 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 ADAP1O75689 374 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 TSPAN9O75954 239 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 BRI3O95415 125 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 IFNA21P01568 189 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 IGHG2P01859 326 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 IGF1P05019 195 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 OR9G9P0C7N8 305 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 EGR2P11161 476 aaPredicted RBP4.32□□□□□ -1.72
ZEB1-220ENST00000560909 CXCL3P19876 107 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 COMPP49747 757 aaPredicted RBP4.32□□□□□ -1.72
ZEB1-220ENST00000560909 H2BFSP57053 126 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 OR2B8PP59922 312 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 ERVK-16P61578 105 aa4.32□□□□□ -1.72
ZEB1-220ENST00000560909 HSPE1P61604 102 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms