RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 OR4A16Q8NH70 328 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 EAF1Q96JC9 268 aaPredicted RBP9.04□□□□□ -0.96
SNX1-212ENST00000560861 GON7Q9BXV9 100 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 CYTL1Q9NRR1 136 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 TPSG1Q9NRR2 321 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 PRNDQ9UKY0 176 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 TCF19Q9Y242 345 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 WSB1Q9Y6I7 421 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 A0A1B0GW64 132 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 CGB1A6NKQ9 187 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 WRBO00258 174 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 RGS13O14921 159 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 SLC25A17O43808 307 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 TGFAP01135 160 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 SNRNP70P08621 437 aaKnown RBP9.03□□□□□ -0.96
SNX1-212ENST00000560861 IAPPP10997 89 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 PVALBP20472 110 aaPredicted RBP9.03□□□□□ -0.96
SNX1-212ENST00000560861 DYNLT3P51808 116 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 SSBP2P81877 361 aaPredicted RBP9.03□□□□□ -0.96
SNX1-212ENST00000560861 KRTAP1-1Q07627 177 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 PRSS8Q16651 343 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 VMA21Q3ZAQ7 101 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 TMEM14EPQ6UXP3 125 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 HAPLN4Q86UW8 402 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 CIARTQ8N365 385 aaPredicted RBP9.03□□□□□ -0.96
SNX1-212ENST00000560861 INO80EQ8NBZ0 244 aaPredicted RBP9.03□□□□□ -0.96
SNX1-212ENST00000560861 VSTM2AQ8TAG5 236 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 OR4C12Q96R67 309 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 TSNAXQ99598 290 aaKnown RBP9.03□□□□□ -0.96
SNX1-212ENST00000560861 ARL6Q9H0F7 186 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 MEGF9Q9H1U4 602 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 ZNF430Q9H8G1 570 aaPredicted RBP9.03□□□□□ -0.96
SNX1-212ENST00000560861 CACFD1Q9UGQ2 172 aa9.03□□□□□ -0.96
SNX1-212ENST00000560861 IGHV3OR16-10A0A075B7F0 116 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 A0A0U1RQK1 487 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 TEX50A0A1B0GTY4 177 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 PMS2P5A8MQ11 134 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 INS-IGF2F8WCM5 200 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 RRHO14718 337 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 MOSP00540 346 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 IGKV1D-33P01593 117 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 IGKV1-33P01594 117 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 AP2S1P53680 142 aaPredicted RBP9.02□□□□□ -0.97
SNX1-212ENST00000560861 RPL8P62917 257 aaKnown RBP9.02□□□□□ -0.97
SNX1-212ENST00000560861 VAMP2P63027 116 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 PRCDQ00LT1 54 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 EWSR1Q01844 656 aaKnown RBP eCLIP9.02□□□□□ -0.97
SNX1-212ENST00000560861 PJVKQ0ZLH3 352 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 SPINK9Q5DT21 86 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 FAM120AOSQ5T036 256 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 BRD3OSQ6XYD6 125 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 STPG2Q8N412 459 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 OR2T10Q8NGZ9 312 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 OR5B3Q8NH48 314 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 PIFOQ8TCI5 191 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 DTD1Q8TEA8 209 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 TMEM170AQ8WVE7 144 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 SLA2Q9H6Q3 261 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 WFDC1Q9HC57 220 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 FBXL17Q9UF56 701 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 SIGLEC9Q9Y336 463 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 OR51B2Q9Y5P1 312 aa9.02□□□□□ -0.97
SNX1-212ENST00000560861 SOX21Q9Y651 276 aaPredicted RBP9.02□□□□□ -0.97
SNX1-212ENST00000560861 TEP1Q99973 2627 aaKnown RBP9.01□□□□□ -0.97
SNX1-212ENST00000560861 C15orf62A8K5M9 175 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 E7EUB6 86 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 NBR2O15453 112 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 LY86O95711 162 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 CFDP00746 253 aaPredicted RBP9.01□□□□□ -0.97
SNX1-212ENST00000560861 C4BPBP20851 252 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 CD24P25063 80 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 NUP62P37198 522 aaPredicted RBP9.01□□□□□ -0.97
SNX1-212ENST00000560861 F2RL1P55085 397 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 RPL23AP62750 156 aaKnown RBP9.01□□□□□ -0.97
SNX1-212ENST00000560861 NHLH2Q02577 135 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 BSXQ3C1V8 233 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 CYB5R2Q6BCY4 276 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 CLEC9AQ6UXN8 241 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 STOML3Q8TAV4 291 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 CIB3Q96Q77 187 aaPredicted RBP9.01□□□□□ -0.97
SNX1-212ENST00000560861 ARPC5LQ9BPX5 153 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 FBXL15Q9H469 300 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 NDUFA4L2Q9NRX3 87 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 FKBP11Q9NYL4 201 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 PSENENQ9NZ42 101 aa9.01□□□□□ -0.97
SNX1-212ENST00000560861 KANTRA0A1W2PQU2 76 aa9□□□□□ -0.97
SNX1-212ENST00000560861 CEBPZOSA8MTT3 80 aa9□□□□□ -0.97
SNX1-212ENST00000560861 H3BP45 60 aa9□□□□□ -0.97
SNX1-212ENST00000560861 TAAR5O14804 337 aa9□□□□□ -0.97
SNX1-212ENST00000560861 RBMXL2O75526 392 aaKnown RBP9□□□□□ -0.97
SNX1-212ENST00000560861 IFNA17P01571 189 aa9□□□□□ -0.97
SNX1-212ENST00000560861 BRS3P32247 399 aa9□□□□□ -0.97
SNX1-212ENST00000560861 MAS1LP35410 378 aa9□□□□□ -0.97
SNX1-212ENST00000560861 SULT1A1P50225 295 aa9□□□□□ -0.97
SNX1-212ENST00000560861 CAV2P51636 162 aa9□□□□□ -0.97
SNX1-212ENST00000560861 BAXQ07812 192 aa9□□□□□ -0.97
SNX1-212ENST00000560861 ARL16Q0P5N6 197 aa9□□□□□ -0.97
SNX1-212ENST00000560861 TUSC1Q2TAM9 212 aa9□□□□□ -0.97
SNX1-212ENST00000560861 C10orf55Q5SWW7 151 aa9□□□□□ -0.97
SNX1-212ENST00000560861 C9orf139Q6ZV77 190 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms